miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42476_ssp-MIR437b:mirbase
Length = 172
Score = 341 bits (172), Expect = 2e-94
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 35 aagtcaaatttctttagttttggacaagtttataaaaatgcacaaacatcacaacatcaa 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcaaatttctttagttttggacaagtttataaaaatgcacaaacatcacaacatcaa 60
Query: 95 actacatttattagatacatcatgaaatatactttgatagtgcatttatttgatattgca 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actacatttattagatacatcatgaaatatactttgatagtgcatttatttgatattgca 120
Query: 155 gatattaatatatttttgtataaacttggtcaaagttagacaagtttgacat 206
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatattaatatatttttgtataaacttggtcaaagttagacaagtttgacat 172
>42613_sbi-MIR437n:mirbase
Length = 182
Score = 81.8 bits (41), Expect = 2e-16
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 128 ttgatagtgcatttatttgatattgcagatattaatatatttttgtataaacttggtcaa 187
||||||||||| ||||||| |||||| ||| ||| ||||||||| || ||||||||| ||
Sbjct: 102 ttgatagtgcaattatttggtattgctgatgttagtatatttttctacaaacttggttaa 161
Query: 188 agttagacaagtttgac 204
||||||| |||||||||
Sbjct: 162 agttagagaagtttgac 178
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 168 ttttgtataaacttggtcaaagtt 191
|||| |||||||||||||||||||
Sbjct: 39 ttttctataaacttggtcaaagtt 16
>42619_sbi-MIR437t:mirbase
Length = 170
Score = 75.8 bits (38), Expect = 1e-14
Identities = 116/139 (83%), Gaps = 6/139 (4%)
Strand = Plus / Minus
Query: 68 aaaaatgcacaaacatca-caacatcaaactacatttattagatacatcatgaaata-ta 125
||||||||||||||||| | ||||||||||| ||| ||| | ||| || |||||| ||
Sbjct: 135 aaaaatgcacaaacatctgctacatcaaactatattcattgcacacaccaggaaataata 76
Query: 126 ctttgatagtgcatttatttgatattgcagatattaatatatttttgtataaacttggtc 185
|| ||||||| ||| ||||||||||| |||| ||||||||||||| |||||||||
Sbjct: 75 tttcgatagtggattcatttgatattgtagatgttaatatatttttc----aacttggtc 20
Query: 186 aaagttagacaagtttgac 204
|||| ||||||||||||||
Sbjct: 19 aaagatagacaagtttgac 1
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 166 atttttgtataaacttggtcaaagttagacaagtttgac 204
|||||| |||||||||||||||||||||| |||||||||
Sbjct: 130 atttttctataaacttggtcaaagttagagaagtttgac 168
>42606_sbi-MIR437f:mirbase
Length = 174
Score = 69.9 bits (35), Expect = 9e-13
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 115 catgaaatatactttgatagtgcatttatttgatattgcagatattaatatatttttgta 174
|||||||||| ||||||||||||||||||| ||||| |||| ||||||||||||| ||
Sbjct: 92 catgaaatatgtcttgatagtgcatttatttggtattgtagatgttaatatatttttcta 33
Query: 175 taaac-ttggtcaaagttagacaagtttgac 204
| || || ||||||||||| |||||||||
Sbjct: 32 cagacttttttcaaagttagagaagtttgac 2
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 168 ttttgtataaacttggtcaaagttagacaagtttgac 204
|||| |||||||||||||||||||||| |||||||||
Sbjct: 134 ttttctataaacttggtcaaagttagagaagtttgac 170
>42063_osa-MIR437:mirbase
Length = 213
Score = 69.9 bits (35), Expect = 9e-13
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 166 atttttgtataaacttggtcaaagttagacaagtttgacatagaacaaagctaaa 220
|||||| |||||||||||||||||||||| ||||||||| ||| ||||| |||||
Sbjct: 135 atttttctataaacttggtcaaagttagagaagtttgacttaggacaaaactaaa 189
Score = 50.1 bits (25), Expect = 8e-07
Identities = 77/93 (82%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 131 atagtgcatttatttgatattgcagatattaatatatttttgtataaacttggtcaaagt 190
|||||| ||||||||| |||| |||| ||||| |||||| || |||||||||||||||
Sbjct: 114 atagtgtatttatttggtattttagatgttaat-tattttactacaaacttggtcaaagt 56
Query: 191 tagacaagtttgacatagaacaaagctaaaaca 223
| | || |||||| || |||||| ||||||||
Sbjct: 55 aaaagaattttgacttacaacaaaactaaaaca 23
>42610_sbi-MIR437k:mirbase
Length = 172
Score = 65.9 bits (33), Expect = 1e-11
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 132 tagtgcatttatttgatattgcagatattaatatatttttgtataaacttggtcaaagtt 191
|||||||||||||||| ||| ||| || | |||||||| || ||||||||||||||||
Sbjct: 96 tagtgcatttatttgaatttgtagaagttgacatatttttctaaaaacttggtcaaagtt 155
Query: 192 agacaagtttgac 204
||| |||||||||
Sbjct: 156 agagaagtttgac 168
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 165 tatttttgtataaacttggtcaaagttagacaagtttgacat 206
||||||| ||||| ||||||||||||||| |||||||||||
Sbjct: 42 tatttttctataagtttggtcaaagttagagaagtttgacat 1
>42608_sbi-MIR437i:mirbase
Length = 170
Score = 65.9 bits (33), Expect = 1e-11
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 128 ttgatagtgcatttatttgatattgcagatattaatatatttttgtataaacttggtcaa 187
|||||||| |||||||||| || || |||| |||||||| ||| || ||||||||||||
Sbjct: 77 ttgatagtacatttatttggtactgaagatgttaatataactttctagaaacttggtcaa 18
Query: 188 agttagacaagtttgac 204
||||| | |||||||||
Sbjct: 17 agttaaagaagtttgac 1
Score = 54.0 bits (27), Expect = 5e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 166 atttttgtataaacttggtcaaagttagacaagtttgac 204
|||||| ||||||||| |||||||||||| |||||||||
Sbjct: 130 atttttctataaactttgtcaaagttagagaagtttgac 168
>42611_sbi-MIR437l:mirbase
Length = 170
Score = 61.9 bits (31), Expect = 2e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 154 agatattaatatatttttgtataaacttggtcaaagttagacaagtttgac 204
|||| ||||||||||||| || |||||||| |||||||||| |||||||||
Sbjct: 118 agatgttaatatatttttctaaaaacttggccaaagttagagaagtttgac 168
>42602_sbi-MIR437b:mirbase
Length = 171
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 166 atttttgtataaacttggtcaaagttagacaagtttgac 204
|||||| |||||||||||||||||||||| |||||||||
Sbjct: 131 atttttctataaacttggtcaaagttagagaagtttgac 169
Score = 50.1 bits (25), Expect = 8e-07
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 115 catgaaatatactttgatagtgcatttatttgatattgcagatattaatatatttttgta 174
|||||||||| |||||| ||| ||||||| ||||| | || |||||||||||||||
Sbjct: 89 catgaaatatgtcttgataatgcttttatttagtattgtatatgctaatatatttttgta 30
Query: 175 taaacttggtcaaagttagacaagtttga 203
||| ||| ||||| ||||| ||||||||
Sbjct: 29 taacattgatcaaaattagagaagtttga 1
>42475_ssp-MIR437a:mirbase
Length = 175
Score = 61.9 bits (31), Expect = 2e-10
Identities = 78/91 (85%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 115 catgaaatatactttgatagtgcatttatttgatattgcagatattaatata-tttttgt 173
||||||||||| ||||||| |||||||| |||| ||| |||| ||||||| ||||| |
Sbjct: 84 catgaaatatattttgataatgcattta-ttgaacttgtagatgataatatattttttct 142
Query: 174 ataaacttggtcaaagttagacaagtttgac 204
| ||||||| ||||||||||| |||||||||
Sbjct: 143 aaaaacttgatcaaagttagagaagtttgac 173
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 166 atttttgtataaacttggtcaaagttagacaagtttgac 204
|||||| |||||||||| ||||||||||| | |||||||
Sbjct: 41 atttttctataaacttgatcaaagttagagaggtttgac 3
>42621_sbi-MIR437v:mirbase
Length = 114
Score = 60.0 bits (30), Expect = 9e-10
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 143 tttgatattgcagatattaatatatttttgtataaacttggtcaaagttagacaagtttg 202
|||||||||| |||| || || |||||| ||||||||||| |||||||||| |||||||
Sbjct: 51 tttgatattgtagatgttgatgcatttttctataaacttggacaaagttagagaagtttg 110
Query: 203 ac 204
||
Sbjct: 111 ac 112
>42477_ssp-MIR437c:mirbase
Length = 177
Score = 60.0 bits (30), Expect = 9e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 131 atagtgcatttatttgatattgcagatattaatatatttttgtataaacttggtcaaagt 190
|||||||||||||| || ||| |||| ||||||||||||| || || |||||||||||
Sbjct: 102 atagtgcatttattcgaacttgtagatgttaatatatttttctaaaactttggtcaaagt 161
Query: 191 tagacaagtttgac 204
|||| |||| ||||
Sbjct: 162 tagagaagtctgac 175
>42609_sbi-MIR437j:mirbase
Length = 172
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 168 ttttgtataaacttggtcaaagttagacaagtttgac 204
|||| |||||||||||||||||||||| |||||||||
Sbjct: 37 ttttctataaacttggtcaaagttagagaagtttgac 1
Score = 50.1 bits (25), Expect = 8e-07
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 128 ttgatagtgcatttatttgatattgcagatattaatatatttttgtataaacttggtcaa 187
||||||| |||||||||| ||| |||| ||||| ||||||| | |||| |||||||
Sbjct: 94 ttgatagcacatttatttgtacttgtagatgttaatgtattttttgaaaaacatggtcaa 153
Query: 188 agttagacaagtttgac 204
||||||| |||||||||
Sbjct: 154 agttagagaagtttgac 170
>42607_sbi-MIR437g:mirbase
Length = 176
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 168 ttttgtataaacttggtcaaagttagacaagtttgac 204
|||| |||||||||||||||||||||| |||||||||
Sbjct: 136 ttttctataaacttggtcaaagttagagaagtttgac 172
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 176 aaacttggtcaaagttagacaagtttgac 204
|||||| |||||||||||| |||||||||
Sbjct: 31 aaacttagtcaaagttagaaaagtttgac 3
>42620_sbi-MIR437u:mirbase
Length = 164
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 165 tatttttgtataaacttggtcaaagttagacaagtttgac 204
||||||| |||||||||||| ||||||||| |||||||||
Sbjct: 123 tatttttctataaacttggtgaaagttagagaagtttgac 162
Score = 48.1 bits (24), Expect = 3e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 128 ttgatagtgcatttatttgatattgcagatattaatatattttt 171
||||||||||| |||||| | |||||||| |||||||||||||
Sbjct: 75 ttgatagtgcacttatttcagcttgcagatgttaatatattttt 32
>42615_sbi-MIR437p:mirbase
Length = 188
Score = 54.0 bits (27), Expect = 5e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 174 ataaacttggtcaaagttagacaagtttgac 204
||||||||||||||||||||| |||||||||
Sbjct: 154 ataaacttggtcaaagttagagaagtttgac 184
Score = 48.1 bits (24), Expect = 3e-06
Identities = 68/82 (82%), Gaps = 3/82 (3%)
Strand = Plus / Minus
Query: 128 ttgatagtgcatttatttgatattgcagatattaatatatttttg---tataaacttggt 184
||||||||||||||||||| ||||| |||| || ||||| |||| || ||||| |||
Sbjct: 82 ttgatagtgcatttatttggtattgtagatgctagtatatatttgtcctacaaactcggt 23
Query: 185 caaagttagacaagtttgacat 206
|| |||||| |||||||||||
Sbjct: 22 cagtgttagagaagtttgacat 1
>42605_sbi-MIR437e:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 5e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 162 atatatttttgtataaacttggtcaaagttagacaagtttgac 204
|||||||||| | ||||||||||||||||||| |||||||||
Sbjct: 57 atatatttttctgaaaacttggtcaaagttagagaagtttgac 99
>42617_sbi-MIR437r:mirbase
Length = 180
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 173 tataaacttggtcaaagttagacaagtttgac 204
||||||||||| |||||||||| |||||||||
Sbjct: 145 tataaacttggccaaagttagagaagtttgac 176
Score = 40.1 bits (20), Expect = 8e-04
Identities = 50/60 (83%)
Strand = Plus / Minus
Query: 142 atttgatattgcagatattaatatatttttgtataaacttggtcaaagttagacaagttt 201
||||||| ||| | |||||| || |||||| |||| ||||||||||| | ||| ||||||
Sbjct: 64 atttgatgttgtaaatattagtacatttttctatagacttggtcaaaataagagaagttt 5
>42604_sbi-MIR437d:mirbase
Length = 136
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 173 tataaacttggtcaaagttagacaagtttgac 204
|||||||||||| ||||||||| |||||||||
Sbjct: 101 tataaacttggttaaagttagagaagtttgac 132
>41838_bdi-MIR5169:mirbase
Length = 210
Score = 48.1 bits (24), Expect = 3e-06
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 163 tatatttttgtataaacttggtcaaagttagacaagtttgacatagaacaaagcta 218
||||||||| |||||||||||||||| ||| | |||||||| | |||||||||||
Sbjct: 152 tatatttttctataaacttggtcaaattta-aaaagtttgaattggaacaaagcta 206
>42614_sbi-MIR437o:mirbase
Length = 175
Score = 46.1 bits (23), Expect = 1e-05
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 159 ttaatatatttttg-tataaacttggtcaaagttagacaagtttgac 204
||||||||||||| || |||||| |||||||||||| |||||||||
Sbjct: 125 ttaatatattttttataaaaacttagtcaaagttagagaagtttgac 171
>42622_sbi-MIR437w:mirbase
Length = 173
Score = 42.1 bits (21), Expect = 2e-04
Identities = 64/78 (82%), Gaps = 4/78 (5%)
Strand = Plus / Plus
Query: 131 atagtgcatttatttgatattgcagatattaata----tatttttgtataaacttggtca 186
|||||||||||| |||| ||| |||| |||||| | ||||| || ||||||||| |
Sbjct: 94 atagtgcatttacttgaacttgtagattttaatagttttttttttctaaaaacttggtga 153
Query: 187 aagttagacaagtttgac 204
|||||||| |||||||||
Sbjct: 154 aagttagagaagtttgac 171
>42612_sbi-MIR437m:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 42/48 (87%), Gaps = 2/48 (4%)
Strand = Plus / Plus
Query: 159 ttaatatatttttgtataaacttggtc--aaagttagacaagtttgac 204
|||||||| |||| || |||||||||| ||||||||| |||||||||
Sbjct: 123 ttaatataattttctaaaaacttggtcaaaaagttagagaagtttgac 170
>42631_sbi-MIR1435a:mirbase
Length = 287
Score = 40.1 bits (20), Expect = 8e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 135 tgcatttatttgatattgcagatattaatatatttt 170
||||||||||||| ||| |||| ||||||||||||
Sbjct: 135 tgcatttatttgaacttgtagatgttaatatatttt 100
