miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34238_dre-mir-27b:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgcatctg 74
||||||||||||||||||||||||||||
Sbjct: 55 tgttcacagtggctaagttctgcatctg 82
>25724_xtr-mir-27b:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttctgca 82
>25910_gga-mir-27b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttctgca 82
>26416_tgu-mir-27:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttctgca 82
>26967_eca-mir-27b:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttctgca 70
>27352_mdo-mir-27b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttctgca 82
>27674_mml-mir-27b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttctgca 82
>28384_hsa-mir-27b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttctgca 82
>30170_ptr-mir-27b:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttctgca 81
>30775_ppy-mir-27b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttctgca 82
>31798_mmu-mir-27b:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttctgca 70
>32681_rno-mir-27b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttctgca 82
>33156_bta-mir-27b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttctgca 82
>33932_ssc-mir-27b:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 50 tgttcacagtggctaagttctgca 73
>34566_fru-mir-27b:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttctgca 70
>34713_tni-mir-27b:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttctgca 70
>26646_cfa-mir-27b:mirbase
Length = 63
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgc 69
|||||||||||||||||||||||
Sbjct: 41 tgttcacagtggctaagttctgc 63
>31445_oan-mir-27b:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgc 69
|||||||||||||||||||||||
Sbjct: 70 tgttcacagtggctaagttctgc 92
>26645_cfa-mir-27a:mirbase
Length = 60
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 38 gtgttcacagtggctaagttc 58
>27351_mdo-mir-27a:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 53 gtgttcacagtggctaagttc 73
>27673_mml-mir-27a:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 48 gtgttcacagtggctaagttc 68
>28187_mne-mir-27a:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 48 gtgttcacagtggctaagttc 68
>28273_ggo-mir-27a:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 48 gtgttcacagtggctaagttc 68
>28383_hsa-mir-27a:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 48 gtgttcacagtggctaagttc 68
>30060_ppa-mir-27a:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 48 gtgttcacagtggctaagttc 68
>30169_ptr-mir-27a:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 48 gtgttcacagtggctaagttc 68
>30774_ppy-mir-27a:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 48 gtgttcacagtggctaagttc 68
>31444_oan-mir-27a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 50 gtgttcacagtggctaagttc 70
>31797_mmu-mir-27a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 53 gtgttcacagtggctaagttc 73
>32680_rno-mir-27a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 53 gtgttcacagtggctaagttc 73
>33154_bta-mir-27a:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 51 gtgttcacagtggctaagttc 71
>33155_bta-mir-27a:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 51 gtgttcacagtggctaagttc 71
>33931_ssc-mir-27a:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 51 gtgttcacagtggctaagttc 71
>34240_dre-mir-27d:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttct 67
|||||||||||||||||||||
Sbjct: 55 tgttcacagtggctaagttct 75
>25449_pma-mir-27a:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 48 tgttcacagtggctaagttc 67
>25723_xtr-mir-27a:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>25725_xtr-mir-27c-1:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>25726_xtr-mir-27c-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>26966_eca-mir-27a:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27491_age-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27599_sla-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>31404_lca-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>34237_dre-mir-27a:mirbase
Length = 131
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 77 tgttcacagtggctaagttc 96
>34241_dre-mir-27e:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 63 tgttcacagtggctaagttc 82
>34568_fru-mir-27e:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttc 77
>34714_tni-mir-27c:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 gtgttcacagtggctaagttctgc 69
||||||||||||| ||||||||||
Sbjct: 49 gtgttcacagtggttaagttctgc 72
>34715_tni-mir-27e:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttc 77
>34239_dre-mir-27c:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgc 69
|||||||||||| ||||||||||
Sbjct: 54 tgttcacagtggttaagttctgc 76
>34567_fru-mir-27c:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgc 69
|||||||||||| ||||||||||
Sbjct: 52 tgttcacagtggttaagttctgc 74
