miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25731_xtr-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>25732_xtr-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>25915_gga-mir-30a:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>25916_gga-mir-30a:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>26423_tgu-mir-30b:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 10 ctgtaaacatcctcgactggaagc 33
>26424_tgu-mir-30b:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 10 ctgtaaacatcctcgactggaagc 33
>27356_mdo-mir-30a:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>27680_mml-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>27681_mml-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>28278_ggo-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>28279_ggo-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>28391_hsa-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>30066_ppa-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>30065_ppa-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>30176_ptr-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>30177_ptr-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>30781_ppy-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>30782_ppy-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>31450_oan-mir-30a:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 30 ctgtaaacatcctcgactggaagc 53
>31806_mmu-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>32687_rno-mir-30a:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 5 ctgtaaacatcctcgactggaagc 28
>33164_bta-mir-30a:mirbase
Length = 67
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 1 ctgtaaacatcctcgactggaagc 24
>33938_ssc-mir-30a:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 20 ctgtaaacatcctcgactggaagc 43
>33939_ssc-mir-30a:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||||||||
Sbjct: 20 ctgtaaacatcctcgactggaagc 43
>26653_cfa-mir-30a:mirbase
Length = 63
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgtaaacatcctcgactggaagc 31
|||||||||||||||||||||||
Sbjct: 1 tgtaaacatcctcgactggaagc 23
>25737_xtr-mir-30e:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 tctgtaaacatcctcgactggaagc 31
|||||||||||||| ||||||||||
Sbjct: 15 tctgtaaacatccttgactggaagc 39
>26421_tgu-mir-30a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 tctgtaaacatcctcgactggaagc 31
|||||||||||||| ||||||||||
Sbjct: 18 tctgtaaacatccttgactggaagc 42
>26422_tgu-mir-30a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 tctgtaaacatcctcgactggaagc 31
|||||||||||||| ||||||||||
Sbjct: 18 tctgtaaacatccttgactggaagc 42
>31810_mmu-mir-30d:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 tctgtaaacatcctcgactggaagc 31
||||||||||||| |||||||||||
Sbjct: 10 tctgtaaacatccccgactggaagc 34
>32692_rno-mir-30d:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 tctgtaaacatcctcgactggaagc 31
||||||||||||| |||||||||||
Sbjct: 10 tctgtaaacatccccgactggaagc 34
>25457_pma-mir-30c:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||||||||| ||||
Sbjct: 12 ctgtaaacatcctcgactgaaagc 35
>25458_pma-mir-30d:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
|||||||||||| |||||||||||
Sbjct: 11 ctgtaaacatccacgactggaagc 34
>25736_xtr-mir-30d:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
|||||||||||| |||||||||||
Sbjct: 10 ctgtaaacatccccgactggaagc 33
>25921_gga-mir-30e:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||| ||||||||||
Sbjct: 18 ctgtaaacatccttgactggaagc 41
>25920_gga-mir-30d:mirbase
Length = 64
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
|||||||||||| |||||||||||
Sbjct: 5 ctgtaaacatccccgactggaagc 28
>26427_tgu-mir-30d:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
|||||||||||| |||||||||||
Sbjct: 2 ctgtaaacatccccgactggaagc 25
>26428_tgu-mir-30d:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
|||||||||||| |||||||||||
Sbjct: 2 ctgtaaacatccccgactggaagc 25
>26979_eca-mir-30e:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||| ||||||||||
Sbjct: 16 ctgtaaacatccttgactggaagc 39
>27686_mml-mir-30e:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||| ||||||||||
Sbjct: 16 ctgtaaacatccttgactggaagc 39
>28396_hsa-mir-30e:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||| ||||||||||
Sbjct: 16 ctgtaaacatccttgactggaagc 39
>30182_ptr-mir-30e:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||| ||||||||||
Sbjct: 15 ctgtaaacatccttgactggaagc 38
>30786_ppy-mir-30e:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||| ||||||||||
Sbjct: 16 ctgtaaacatccttgactggaagc 39
>31453_oan-mir-30d:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
|||||||||||| |||||||||||
Sbjct: 28 ctgtaaacatccccgactggaagc 51
>31454_oan-mir-30e:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||| ||||||||||
Sbjct: 15 ctgtaaacatccttgactggaagc 38
>31811_mmu-mir-30e:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||| ||||||||||
Sbjct: 16 ctgtaaacatccttgactggaagc 39
>32693_rno-mir-30e:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||| ||||||||||
Sbjct: 16 ctgtaaacatccttgactggaagc 39
>33169_bta-mir-30e:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||| ||||||||||
Sbjct: 16 ctgtaaacatccttgactggaagc 39
>33945_ssc-mir-30e:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||| ||||||||||
Sbjct: 8 ctgtaaacatccttgactggaagc 31
>33946_ssc-mir-30e:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||| ||||||||||
Sbjct: 8 ctgtaaacatccttgactggaagc 31
>34250_dre-mir-30d:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
|||||||||||| |||||||||||
Sbjct: 34 ctgtaaacatccccgactggaagc 57
>34251_dre-mir-30e-2:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
||||||||||||| ||||||||||
Sbjct: 10 ctgtaaacatccttgactggaagc 33
>34575_fru-mir-30d:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
|||||||||||| |||||||||||
Sbjct: 20 ctgtaaacatccccgactggaagc 43
>34722_tni-mir-30d:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 ctgtaaacatcctcgactggaagc 31
|||||||||||| |||||||||||
Sbjct: 14 ctgtaaacatccccgactggaagc 37
>26658_cfa-mir-30e:mirbase
Length = 64
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 tgtaaacatcctcgactggaagc 31
|||||||||||| ||||||||||
Sbjct: 1 tgtaaacatccttgactggaagc 23
>26657_cfa-mir-30d:mirbase
Length = 60
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 tgtaaacatcctcgactggaagc 31
||||||||||| |||||||||||
Sbjct: 1 tgtaaacatccccgactggaagc 23
>26978_eca-mir-30d:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 tgtaaacatcctcgactggaagc 31
||||||||||| |||||||||||
Sbjct: 7 tgtaaacatccccgactggaagc 29
>27685_mml-mir-30d:mirbase
Length = 69
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 tgtaaacatcctcgactggaagc 31
||||||||||| |||||||||||
Sbjct: 5 tgtaaacatccccgactggaagc 27
>28193_mne-mir-30d:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 tgtaaacatcctcgactggaagc 31
||||||||||| |||||||||||
Sbjct: 6 tgtaaacatccccgactggaagc 28
>28281_ggo-mir-30d:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 tgtaaacatcctcgactggaagc 31
||||||||||| |||||||||||
Sbjct: 6 tgtaaacatccccgactggaagc 28
>28395_hsa-mir-30d:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 tgtaaacatcctcgactggaagc 31
||||||||||| |||||||||||
Sbjct: 6 tgtaaacatccccgactggaagc 28
>30068_ppa-mir-30d:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 tgtaaacatcctcgactggaagc 31
||||||||||| |||||||||||
Sbjct: 6 tgtaaacatccccgactggaagc 28
>30181_ptr-mir-30d:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 tgtaaacatcctcgactggaagc 31
||||||||||| |||||||||||
Sbjct: 6 tgtaaacatccccgactggaagc 28
>30785_ppy-mir-30d:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 tgtaaacatcctcgactggaagc 31
||||||||||| |||||||||||
Sbjct: 6 tgtaaacatccccgactggaagc 28
>33168_bta-mir-30d:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 tgtaaacatcctcgactggaagc 31
||||||||||| |||||||||||
Sbjct: 6 tgtaaacatccccgactggaagc 28
>33944_ssc-mir-30d:mirbase
Length = 79
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 tgtaaacatcctcgactggaagc 31
||||||||||| |||||||||||
Sbjct: 8 tgtaaacatccccgactggaagc 30
