miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>25752_xtr-mir-96:mirbase
          Length = 75

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 48 tgagcaattatgtgtagtgcc 68
          |||||||||||||||||||||
Sbjct: 46 tgagcaattatgtgtagtgcc 66

>34260_dre-mir-96:mirbase
          Length = 125

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 48 tgagcaattatgtgtagtgcc 68
          |||||||||||||||||||||
Sbjct: 62 tgagcaattatgtgtagtgcc 82

>34578_fru-mir-96:mirbase
          Length = 102

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 48 tgagcaattatgtgtagtgcc 68
          |||||||||||||||||||||
Sbjct: 54 tgagcaattatgtgtagtgcc 74

>34725_tni-mir-96:mirbase
          Length = 78

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 48 tgagcaattatgtgtagtgcc 68
          |||||||||||||||||||||
Sbjct: 47 tgagcaattatgtgtagtgcc 67