miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25468_pma-mir-100a:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 tcgccacaaacccgtagattcgaactt 35
||||||||||||||||||| |||||||
Sbjct: 9 tcgccacaaacccgtagatccgaactt 35
>25470_pma-mir-100c:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 tcgccacaaacccgtagattcgaactt 35
||||||||||||||||||| |||||||
Sbjct: 78 tcgccacaaacccgtagatccgaactt 52
>25930_gga-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 7 gccacaaacccgtagatccgaactt 31
>26440_tgu-mir-100-1:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 5 gccacaaacccgtagatccgaactt 29
>26441_tgu-mir-100-2:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 5 gccacaaacccgtagatccgaactt 29
>27364_mdo-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 7 gccacaaacccgtagatccgaactt 31
>27501_age-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 7 gccacaaacccgtagatccgaactt 31
>27563_lla-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 7 gccacaaacccgtagatccgaactt 31
>27610_sla-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 7 gccacaaacccgtagatccgaactt 31
>27704_mml-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 7 gccacaaacccgtagatccgaactt 31
>28293_ggo-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 7 gccacaaacccgtagatccgaactt 31
>28414_hsa-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 7 gccacaaacccgtagatccgaactt 31
>30080_ppa-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 7 gccacaaacccgtagatccgaactt 31
>30198_ptr-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 7 gccacaaacccgtagatccgaactt 31
>30803_ppy-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 7 gccacaaacccgtagatccgaactt 31
>31471_oan-mir-100:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 8 gccacaaacccgtagatccgaactt 32
>31827_mmu-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 7 gccacaaacccgtagatccgaactt 31
>32708_rno-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 7 gccacaaacccgtagatccgaactt 31
>33187_bta-mir-100:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 7 gccacaaacccgtagatccgaactt 31
>33958_ssc-mir-100:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 10 gccacaaacccgtagatccgaactt 34
>34264_dre-mir-100-2:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 gccacaaacccgtagattcgaactt 35
||||||||||||||||| |||||||
Sbjct: 5 gccacaaacccgtagatccgaactt 29
