miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25759_xtr-mir-103-2:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 48 tgtcaagcagcatcgtacagggct 71
||||||||||||| ||||||||||
Sbjct: 45 tgtcaagcagcattgtacagggct 68
>25934_gga-mir-103-2:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 48 tgtcaagcagcatcgtacagggct 71
||||||||||||| ||||||||||
Sbjct: 46 tgtcaagcagcattgtacagggct 69
>26445_tgu-mir-103-2:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 48 tgtcaagcagcatcgtacagggct 71
||||||||||||| ||||||||||
Sbjct: 36 tgtcaagcagcattgtacagggct 59
>27368_mdo-mir-103-2:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 48 tgtcaagcagcatcgtacagggct 71
||||||||||||| ||||||||||
Sbjct: 45 tgtcaagcagcattgtacagggct 68
>31475_oan-mir-103-2:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 48 tgtcaagcagcatcgtacagggct 71
||||||||||||| ||||||||||
Sbjct: 58 tgtcaagcagcattgtacagggct 81
>26679_cfa-mir-103-2:mirbase
Length = 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 gtcaagcagcatcgtacagggct 71
|||||||||||| ||||||||||
Sbjct: 44 gtcaagcagcattgtacagggct 66
>27000_eca-mir-103:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 gtcaagcagcatcgtacagggct 71
|||||||||||| ||||||||||
Sbjct: 44 gtcaagcagcattgtacagggct 66
>27708_mml-mir-103-2:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 gtcaagcagcatcgtacagggct 71
|||||||||||| ||||||||||
Sbjct: 44 gtcaagcagcattgtacagggct 66
>28418_hsa-mir-103a-2:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 gtcaagcagcatcgtacagggct 71
|||||||||||| ||||||||||
Sbjct: 44 gtcaagcagcattgtacagggct 66
>28420_hsa-mir-103b-2:mirbase
Length = 62
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 49 gtcaagcagcatcgtacagggct 71
|||||||||||| ||||||||||
Sbjct: 27 gtcaagcagcattgtacagggct 5
>30202_ptr-mir-103-2:mirbase
Length = 77
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 gtcaagcagcatcgtacagggct 71
|||||||||||| ||||||||||
Sbjct: 43 gtcaagcagcattgtacagggct 65
>30808_ppy-mir-103-2:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 gtcaagcagcatcgtacagggct 71
|||||||||||| ||||||||||
Sbjct: 44 gtcaagcagcattgtacagggct 66
>31832_mmu-mir-103-2:mirbase
Length = 86
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 gtcaagcagcatcgtacagggct 71
|||||||||||| ||||||||||
Sbjct: 48 gtcaagcagcattgtacagggct 70
>32712_rno-mir-103-2:mirbase
Length = 86
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 gtcaagcagcatcgtacagggct 71
|||||||||||| ||||||||||
Sbjct: 48 gtcaagcagcattgtacagggct 70
>33191_bta-mir-103-2:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 gtcaagcagcatcgtacagggct 71
|||||||||||| ||||||||||
Sbjct: 44 gtcaagcagcattgtacagggct 66
>33962_ssc-mir-103-2:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 gtcaagcagcatcgtacagggct 71
|||||||||||| ||||||||||
Sbjct: 43 gtcaagcagcattgtacagggct 65
>34267_dre-mir-103:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 10 tcagcctctctatggtgctgccttgtg 36
||||||||| || ||||||||||||||
Sbjct: 14 tcagcctctttacggtgctgccttgtg 40
>34269_dre-mir-107b:mirbase
Length = 86
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 50 tcaagcagcatcgtacagggctt 72
||||||||||| |||||||||||
Sbjct: 48 tcaagcagcattgtacagggctt 70
