miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34267_dre-mir-103:mirbase
Length = 88
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatgagaga 73
|||||||||||||||||||||||||||||||
Sbjct: 49 atcaagcagcattgtacagggctatgagaga 79
>25759_xtr-mir-103-2:mirbase
Length = 83
Score = 58.0 bits (29), Expect = 9e-10
Identities = 50/56 (89%), Gaps = 2/56 (3%)
Strand = Plus / Plus
Query: 16 tctttacagtgctatcttgtagcctcaat--caagcagcattgtacagggctatga 69
||||||||||||| |||||||| || || |||||||||||||||||||||||||
Sbjct: 17 tctttacagtgctgccttgtagcatctatgtcaagcagcattgtacagggctatga 72
>26445_tgu-mir-103-2:mirbase
Length = 73
Score = 58.0 bits (29), Expect = 9e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatgagagagca 76
|||||||||||||||||||||||||| ||||||
Sbjct: 38 tcaagcagcattgtacagggctatgaaagagca 70
>31474_oan-mir-103-1:mirbase
Length = 124
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatgag 70
||||||||||||||||||||||||||||
Sbjct: 73 atcaagcagcattgtacagggctatgag 100
>25758_xtr-mir-103-1:mirbase
Length = 85
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 48 atcaagcagcattgtacagggctatga 74
>25933_gga-mir-103-1:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 44 atcaagcagcattgtacagggctatga 70
>26444_tgu-mir-103-1:mirbase
Length = 113
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 77 atcaagcagcattgtacagggctatga 103
>26446_tgu-mir-103-3:mirbase
Length = 113
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 77 atcaagcagcattgtacagggctatga 103
>26678_cfa-mir-103-1:mirbase
Length = 62
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 36 atcaagcagcattgtacagggctatga 62
>27004_eca-mir-107a:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 46 atcaagcagcattgtacagggctatga 72
>27367_mdo-mir-103-1:mirbase
Length = 76
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 42 atcaagcagcattgtacagggctatga 68
>27503_age-mir-103:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 44 atcaagcagcattgtacagggctatga 70
>27565_lla-mir-103:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 44 atcaagcagcattgtacagggctatga 70
>27707_mml-mir-103-1:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 44 atcaagcagcattgtacagggctatga 70
>28203_mne-mir-103:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 44 atcaagcagcattgtacagggctatga 70
>28295_ggo-mir-103:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 44 atcaagcagcattgtacagggctatga 70
>28417_hsa-mir-103a-1:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 44 atcaagcagcattgtacagggctatga 70
>28419_hsa-mir-103b-1:mirbase
Length = 62
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 27 atcaagcagcattgtacagggctatga 1
>30082_ppa-mir-103:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 44 atcaagcagcattgtacagggctatga 70
>30201_ptr-mir-103-1:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 44 atcaagcagcattgtacagggctatga 70
>30807_ppy-mir-103:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 44 atcaagcagcattgtacagggctatga 70
>31831_mmu-mir-103-1:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 48 atcaagcagcattgtacagggctatga 74
>32711_rno-mir-103-1:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 48 atcaagcagcattgtacagggctatga 74
>33190_bta-mir-103-1:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 42 atcaagcagcattgtacagggctatga 68
>33961_ssc-mir-103-1:mirbase
Length = 82
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctatga 69
|||||||||||||||||||||||||||
Sbjct: 46 atcaagcagcattgtacagggctatga 72
>25934_gga-mir-103-2:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 48 tcaagcagcattgtacagggctatga 73
>26679_cfa-mir-103-2:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 45 tcaagcagcattgtacagggctatga 70
>27000_eca-mir-103:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 45 tcaagcagcattgtacagggctatga 70
>27368_mdo-mir-103-2:mirbase
Length = 84
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 47 tcaagcagcattgtacagggctatga 72
>27708_mml-mir-103-2:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 45 tcaagcagcattgtacagggctatga 70
>28418_hsa-mir-103a-2:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 45 tcaagcagcattgtacagggctatga 70
>28420_hsa-mir-103b-2:mirbase
Length = 62
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 26 tcaagcagcattgtacagggctatga 1
>30202_ptr-mir-103-2:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 44 tcaagcagcattgtacagggctatga 69
>30808_ppy-mir-103-2:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 45 tcaagcagcattgtacagggctatga 70
>31475_oan-mir-103-2:mirbase
Length = 105
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 60 tcaagcagcattgtacagggctatga 85
>31832_mmu-mir-103-2:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 49 tcaagcagcattgtacagggctatga 74
>32712_rno-mir-103-2:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 49 tcaagcagcattgtacagggctatga 74
>33191_bta-mir-103-2:mirbase
Length = 76
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 45 tcaagcagcattgtacagggctatga 70
>33962_ssc-mir-103-2:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 44 tcaagcagcattgtacagggctatga 69
>34582_fru-mir-103:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 47 tcaagcagcattgtacagggctatga 72
>34729_tni-mir-103:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctatga 69
||||||||||||||||||||||||||
Sbjct: 51 tcaagcagcattgtacagggctatga 76
>34268_dre-mir-107:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctat 67
|||||||||||||||||||||||||
Sbjct: 47 atcaagcagcattgtacagggctat 71
>34583_fru-mir-107:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctat 67
|||||||||||||||||||||||||
Sbjct: 48 atcaagcagcattgtacagggctat 72
>34730_tni-mir-107:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggctat 67
|||||||||||||||||||||||||
Sbjct: 47 atcaagcagcattgtacagggctat 71
>25761_xtr-mir-107:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 43 tcaagcagcattgtacagggctat 66
>25936_gga-mir-107:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 47 tcaagcagcattgtacagggctat 70
>26448_tgu-mir-107:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 38 tcaagcagcattgtacagggctat 61
>26684_cfa-mir-107:mirbase
Length = 58
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 35 tcaagcagcattgtacagggctat 58
>27005_eca-mir-107b:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 47 tcaagcagcattgtacagggctat 70
>27370_mdo-mir-107:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 50 tcaagcagcattgtacagggctat 73
>27568_lla-mir-107:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 47 tcaagcagcattgtacagggctat 70
>27713_mml-mir-107:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 47 tcaagcagcattgtacagggctat 70
>28207_mne-mir-107:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 47 tcaagcagcattgtacagggctat 70
>28299_ggo-mir-107:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 47 tcaagcagcattgtacagggctat 70
>28425_hsa-mir-107:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 47 tcaagcagcattgtacagggctat 70
>30086_ppa-mir-107:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 47 tcaagcagcattgtacagggctat 70
>30206_ptr-mir-107:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 47 tcaagcagcattgtacagggctat 70
>30813_ppy-mir-107:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 47 tcaagcagcattgtacagggctat 70
>31477_oan-mir-107:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 50 tcaagcagcattgtacagggctat 73
>31836_mmu-mir-107:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 49 tcaagcagcattgtacagggctat 72
>32715_rno-mir-107:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 49 tcaagcagcattgtacagggctat 72
>33196_bta-mir-107:mirbase
Length = 81
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 47 tcaagcagcattgtacagggctat 70
>33966_ssc-mir-107:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tcaagcagcattgtacagggctat 67
||||||||||||||||||||||||
Sbjct: 49 tcaagcagcattgtacagggctat 72
>34269_dre-mir-107b:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 atcaagcagcattgtacagggct 65
|||||||||||||||||||||||
Sbjct: 47 atcaagcagcattgtacagggct 69
