miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25477_pma-mir-128-2:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctctttccctggca 84
|||||||||||||||||||||||||||||||
Sbjct: 54 tctcacagtgaaccggtctctttccctggca 84
>27378_mdo-mir-128:mirbase
Length = 84
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccctg 81
|||||||||||||||||||||||||||||
Sbjct: 49 gtctcacagtgaaccggtctctttccctg 77
>27016_eca-mir-128:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccct 80
||||||||||||||||||||||||||||
Sbjct: 49 gtctcacagtgaaccggtctctttccct 76
>27724_mml-mir-128b:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccct 80
||||||||||||||||||||||||||||
Sbjct: 49 gtctcacagtgaaccggtctctttccct 76
>28438_hsa-mir-128-2:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccct 80
||||||||||||||||||||||||||||
Sbjct: 49 gtctcacagtgaaccggtctctttccct 76
>30215_ptr-mir-128-2:mirbase
Length = 83
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccct 80
||||||||||||||||||||||||||||
Sbjct: 48 gtctcacagtgaaccggtctctttccct 75
>30824_ppy-mir-128-2:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccct 80
||||||||||||||||||||||||||||
Sbjct: 49 gtctcacagtgaaccggtctctttccct 76
>31851_mmu-mir-128-2:mirbase
Length = 76
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccct 80
||||||||||||||||||||||||||||
Sbjct: 45 gtctcacagtgaaccggtctctttccct 72
>32728_rno-mir-128-2:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccct 80
||||||||||||||||||||||||||||
Sbjct: 49 gtctcacagtgaaccggtctctttccct 76
>33207_bta-mir-128-2:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccct 80
||||||||||||||||||||||||||||
Sbjct: 49 gtctcacagtgaaccggtctctttccct 76
>33976_ssc-mir-128-2:mirbase
Length = 80
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccct 80
||||||||||||||||||||||||||||
Sbjct: 46 gtctcacagtgaaccggtctctttccct 73
>31483_oan-mir-128-2:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccc 79
|||||||||||||||||||||||||||
Sbjct: 62 gtctcacagtgaaccggtctctttccc 88
>25946_gga-mir-128-2:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccctg 81
|||||||||||||||||||||||| ||||
Sbjct: 49 gtctcacagtgaaccggtctcttttcctg 77
>26457_tgu-mir-128-2:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccctg 81
|||||||||||||||||||||||| ||||
Sbjct: 64 gtctcacagtgaaccggtctcttttcctg 92
>34286_dre-mir-128-2:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccctg 81
|||||||||||||||||||||||| ||||
Sbjct: 66 gtctcacagtgaaccggtctcttttcctg 94
>34592_fru-mir-128-2:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccctg 81
|||||||||||||||||||||||| ||||
Sbjct: 41 gtctcacagtgaaccggtctcttttcctg 69
>34739_tni-mir-128-2:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctctttccctg 81
|||||||||||||||||||||||| ||||
Sbjct: 41 gtctcacagtgaaccggtctcttttcctg 69
>25769_xtr-mir-128-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctcttt 76
||||||||||||||||||||||||
Sbjct: 48 gtctcacagtgaaccggtctcttt 71
>26695_cfa-mir-128-2:mirbase
Length = 58
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctcttt 76
||||||||||||||||||||||||
Sbjct: 35 gtctcacagtgaaccggtctcttt 58
>31482_oan-mir-128-1:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 gtctcacagtgaaccggtctcttt 76
||||||||||||||||||||||||
Sbjct: 41 gtctcacagtgaaccggtctcttt 64
>34285_dre-mir-128-1:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 49 ggctgtctcacagtgaaccggtctcttt 76
|||| |||||||||||||||||||||||
Sbjct: 53 ggctttctcacagtgaaccggtctcttt 80
>25768_xtr-mir-128-1:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 49 tctcacagtgaaccggtctcttt 71
>25945_gga-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>26456_tgu-mir-128-1:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 39 tctcacagtgaaccggtctcttt 61
>26694_cfa-mir-128-1:mirbase
Length = 56
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 34 tctcacagtgaaccggtctcttt 56
>27017_eca-mir-128-2:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 42 tctcacagtgaaccggtctcttt 64
>27510_age-mir-128:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>27617_sla-mir-128:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>27723_mml-mir-128a:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>28437_hsa-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>30089_ppa-mir-128:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>30214_ptr-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>30823_ppy-mir-128:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>31850_mmu-mir-128-1:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 42 tctcacagtgaaccggtctcttt 64
>32727_rno-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>33206_bta-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>33975_ssc-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>34591_fru-mir-128-1:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 49 tctcacagtgaaccggtctcttt 71
>34738_tni-mir-128-1:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tctcacagtgaaccggtctcttt 76
|||||||||||||||||||||||
Sbjct: 44 tctcacagtgaaccggtctcttt 66
