miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26466_tgu-mir-135a-2:mirbase
Length = 86
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 7 ctgtgctttatggctttttattcctatgtgattgctt 43
||||| |||||||||||||||||||||||||||||||
Sbjct: 7 ctgtggtttatggctttttattcctatgtgattgctt 43
>31492_oan-mir-135b:mirbase
Length = 114
Score = 63.9 bits (32), Expect = 2e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgattgcttctgtaacctcgcgtaggggtgaaagccatgg 74
|||||||||||||||||||||||||||| || | | ||| |||||| ||||||||||||
Sbjct: 31 tatggctttttattcctatgtgattgctgctttgaactcatgtagggctgaaagccatgg 90
>27030_eca-mir-135a-2:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 9 gtgctttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||||||
Sbjct: 17 gtgctttatggctttttattcctatgtgat 46
>27513_age-mir-135-2:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 9 gtgctttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||||||
Sbjct: 17 gtgctttatggctttttattcctatgtgat 46
>27575_lla-mir-135-2:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 9 gtgctttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||||||
Sbjct: 17 gtgctttatggctttttattcctatgtgat 46
>27736_mml-mir-135a-2:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 9 gtgctttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||||||
Sbjct: 17 gtgctttatggctttttattcctatgtgat 46
>28306_ggo-mir-135:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 9 gtgctttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||||||
Sbjct: 17 gtgctttatggctttttattcctatgtgat 46
>28450_hsa-mir-135a-2:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 9 gtgctttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||||||
Sbjct: 17 gtgctttatggctttttattcctatgtgat 46
>30094_ppa-mir-135-2:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 9 gtgctttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||||||
Sbjct: 17 gtgctttatggctttttattcctatgtgat 46
>30225_ptr-mir-135a-2:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 9 gtgctttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||||||
Sbjct: 17 gtgctttatggctttttattcctatgtgat 46
>30834_ppy-mir-135:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 9 gtgctttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||||||
Sbjct: 17 gtgctttatggctttttattcctatgtgat 46
>31864_mmu-mir-135a-2:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 9 gtgctttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||||||
Sbjct: 17 gtgctttatggctttttattcctatgtgat 46
>32737_rno-mir-135a:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 9 gtgctttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||||||
Sbjct: 17 gtgctttatggctttttattcctatgtgat 46
>33219_bta-mir-135a-2:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 9 gtgctttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||||||
Sbjct: 17 gtgctttatggctttttattcctatgtgat 46
>33987_ssc-mir-135-2:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 9 gtgctttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||||||
Sbjct: 17 gtgctttatggctttttattcctatgtgat 46
>25781_xtr-mir-135-2:mirbase
Length = 88
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgattgctt 43
|||||||||||||||||||||||||||||
Sbjct: 16 tatggctttttattcctatgtgattgctt 44
>25956_gga-mir-135a-3:mirbase
Length = 96
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgattgctt 43
|||||||||||||||||||||||||||||
Sbjct: 16 tatggctttttattcctatgtgattgctt 44
>34304_dre-mir-135c-3:mirbase
Length = 127
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 7 ctgtgctttatggctttttattcctatgtgatt 39
||||||||||||||||| |||||||||||||||
Sbjct: 28 ctgtgctttatggctttctattcctatgtgatt 60
>25780_xtr-mir-135-1:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 tttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>25955_gga-mir-135a-2:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 tttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||
Sbjct: 21 tttatggctttttattcctatgtgat 46
>26465_tgu-mir-135a-1:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 tttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||
Sbjct: 9 tttatggctttttattcctatgtgat 34
>31491_oan-mir-135a:mirbase
Length = 109
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 tttatggctttttattcctatgtgat 38
||||||||||||||||||||||||||
Sbjct: 27 tttatggctttttattcctatgtgat 52
>25954_gga-mir-135a-1:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||||||||||||||||||
Sbjct: 15 tatggctttttattcctatgtgatt 39
>26467_tgu-mir-135b:mirbase
Length = 73
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||||||||||||||||||
Sbjct: 11 tatggctttttattcctatgtgatt 35
>26705_cfa-mir-135a-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>26706_cfa-mir-135a-2:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 ttatggctttttattcctatgtgat 38
|||||||||||||||||||||||||
Sbjct: 1 ttatggctttttattcctatgtgat 25
>26707_cfa-mir-135a-2:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 ttatggctttttattcctatgtgat 38
|||||||||||||||||||||||||
Sbjct: 1 ttatggctttttattcctatgtgat 25
>27029_eca-mir-135a:mirbase
Length = 60
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||||||||||||||||||
Sbjct: 2 tatggctttttattcctatgtgatt 26
>27383_mdo-mir-135a:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 ttatggctttttattcctatgtgat 38
|||||||||||||||||||||||||
Sbjct: 22 ttatggctttttattcctatgtgat 46
>27512_age-mir-135-1:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>27574_lla-mir-135-1:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>27735_mml-mir-135a-1:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>28449_hsa-mir-135a-1:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>30093_ppa-mir-135-1:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>30224_ptr-mir-135a-1:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>30835_ppy-mir-135a-1:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>31863_mmu-mir-135a-1:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>33218_bta-mir-135a-1:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>33986_ssc-mir-135-1:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>34302_dre-mir-135c-1:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 7 ctgtgctttatggctttttattcctatgtgatt 39
||||| ||||||||||| |||||||||||||||
Sbjct: 3 ctgtgttttatggctttctattcctatgtgatt 35
>34303_dre-mir-135c-2:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 7 ctgtgctttatggctttttattcctatgtgatt 39
||||| ||||||||||| |||||||||||||||
Sbjct: 3 ctgtgttttatggctttctattcctatgtgatt 35
>34598_fru-mir-135a:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 7 ctgtgctttatggctttttattcctatgtgatt 39
||||| ||||||||||| |||||||||||||||
Sbjct: 3 ctgtgttttatggctttctattcctatgtgatt 35
>34745_tni-mir-135a:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 7 ctgtgctttatggctttttattcctatgtgatt 39
||||| ||||||||||| |||||||||||||||
Sbjct: 3 ctgtgttttatggctttctattcctatgtgatt 35
>26708_cfa-mir-135b:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgattgct 42
|||||||||| |||||||||||||||||
Sbjct: 15 tatggcttttcattcctatgtgattgct 42
>27031_eca-mir-135b:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgattgct 42
|||||||||| |||||||||||||||||
Sbjct: 15 tatggcttttcattcctatgtgattgct 42
>27384_mdo-mir-135b:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgattgct 42
|||||||||| |||||||||||||||||
Sbjct: 18 tatggcttttcattcctatgtgattgct 45
>27737_mml-mir-135b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgattgct 42
|||||||||| |||||||||||||||||
Sbjct: 16 tatggcttttcattcctatgtgattgct 43
>28451_hsa-mir-135b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgattgct 42
|||||||||| |||||||||||||||||
Sbjct: 16 tatggcttttcattcctatgtgattgct 43
>30226_ptr-mir-135b:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgattgct 42
|||||||||| |||||||||||||||||
Sbjct: 16 tatggcttttcattcctatgtgattgct 43
>30836_ppy-mir-135b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgattgct 42
|||||||||| |||||||||||||||||
Sbjct: 16 tatggcttttcattcctatgtgattgct 43
>31865_mmu-mir-135b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgattgct 42
|||||||||| |||||||||||||||||
Sbjct: 16 tatggcttttcattcctatgtgattgct 43
>32738_rno-mir-135b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgattgct 42
|||||||||| |||||||||||||||||
Sbjct: 16 tatggcttttcattcctatgtgattgct 43
>34300_dre-mir-135a:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 ttatggctttttattcctatgtga 37
||||||||||||||||||||||||
Sbjct: 15 ttatggctttttattcctatgtga 38
>33220_bta-mir-135b:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgatt 39
|||||||||| ||||||||||||||
Sbjct: 14 tatggcttttcattcctatgtgatt 38
>25488_pma-mir-135b:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctatgtgat 38
|||||||||||||||||| |||||
Sbjct: 12 tatggctttttattcctacgtgat 35
>34301_dre-mir-135b:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctat 33
|||||||||||||||||||
Sbjct: 13 tatggctttttattcctat 31
>34599_fru-mir-135b:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctat 33
|||||||||||||||||||
Sbjct: 16 tatggctttttattcctat 34
>34746_tni-mir-135b:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 15 tatggctttttattcctat 33
|||||||||||||||||||
Sbjct: 14 tatggctttttattcctat 32
