miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31864_mmu-mir-135a-2:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||||||||
Sbjct: 23 tatggctttttattcctatgtgatcgtaa 51
>32737_rno-mir-135a:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||||||||
Sbjct: 23 tatggctttttattcctatgtgatcgtaa 51
>26467_tgu-mir-135b:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 ttgtatggctttttattcctacgtgat 35
||||||||||||||||||||| |||||
Sbjct: 8 ttgtatggctttttattcctatgtgat 34
>25954_gga-mir-135a-1:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 tgtatggctttttattcctacgtgat 35
|||||||||||||||||||| |||||
Sbjct: 13 tgtatggctttttattcctatgtgat 38
>25780_xtr-mir-135-1:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 23 tatggctttttattcctatgtgatagtaa 51
>25955_gga-mir-135a-2:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 23 tatggctttttattcctatgtgatagtaa 51
>26465_tgu-mir-135a-1:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 11 tatggctttttattcctatgtgatagtaa 39
>26706_cfa-mir-135a-2:mirbase
Length = 62
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 2 tatggctttttattcctatgtgatagtaa 30
>26707_cfa-mir-135a-2:mirbase
Length = 62
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 2 tatggctttttattcctatgtgatagtaa 30
>27030_eca-mir-135a-2:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 23 tatggctttttattcctatgtgatagtaa 51
>27383_mdo-mir-135a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 23 tatggctttttattcctatgtgatagtaa 51
>27513_age-mir-135-2:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 23 tatggctttttattcctatgtgatagtaa 51
>27575_lla-mir-135-2:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 23 tatggctttttattcctatgtgatagtaa 51
>27736_mml-mir-135a-2:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 23 tatggctttttattcctatgtgatagtaa 51
>28306_ggo-mir-135:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 23 tatggctttttattcctatgtgatagtaa 51
>28450_hsa-mir-135a-2:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 23 tatggctttttattcctatgtgatagtaa 51
>30094_ppa-mir-135-2:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 23 tatggctttttattcctatgtgatagtaa 51
>30225_ptr-mir-135a-2:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 23 tatggctttttattcctatgtgatagtaa 51
>30834_ppy-mir-135:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 23 tatggctttttattcctatgtgatagtaa 51
>31491_oan-mir-135a:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 29 tatggctttttattcctatgtgatagtaa 57
>33219_bta-mir-135a-2:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 23 tatggctttttattcctatgtgatagtaa 51
>33987_ssc-mir-135-2:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgatcgtaa 40
|||||||||||||||||| ||||| ||||
Sbjct: 23 tatggctttttattcctatgtgatagtaa 51
>25487_pma-mir-135a:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 15 tatggctttttattcctatgtgat 38
>25781_xtr-mir-135-2:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 16 tatggctttttattcctatgtgat 39
>25956_gga-mir-135a-3:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 16 tatggctttttattcctatgtgat 39
>26466_tgu-mir-135a-2:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 15 tatggctttttattcctatgtgat 38
>26705_cfa-mir-135a-1:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 17 tatggctttttattcctatgtgat 40
>27029_eca-mir-135a:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 2 tatggctttttattcctatgtgat 25
>27512_age-mir-135-1:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 17 tatggctttttattcctatgtgat 40
>27574_lla-mir-135-1:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 17 tatggctttttattcctatgtgat 40
>27735_mml-mir-135a-1:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 17 tatggctttttattcctatgtgat 40
>28449_hsa-mir-135a-1:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 17 tatggctttttattcctatgtgat 40
>30093_ppa-mir-135-1:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 17 tatggctttttattcctatgtgat 40
>30224_ptr-mir-135a-1:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 17 tatggctttttattcctatgtgat 40
>30835_ppy-mir-135a-1:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 17 tatggctttttattcctatgtgat 40
>31492_oan-mir-135b:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 31 tatggctttttattcctatgtgat 54
>31863_mmu-mir-135a-1:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 17 tatggctttttattcctatgtgat 40
>33218_bta-mir-135a-1:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 17 tatggctttttattcctatgtgat 40
>33986_ssc-mir-135-1:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtgat 35
|||||||||||||||||| |||||
Sbjct: 17 tatggctttttattcctatgtgat 40
>34599_fru-mir-135b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tgtatggctttttattccta 29
||||||||||||||||||||
Sbjct: 14 tgtatggctttttattccta 33
>34746_tni-mir-135b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tgtatggctttttattccta 29
||||||||||||||||||||
Sbjct: 12 tgtatggctttttattccta 31
>34300_dre-mir-135a:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 12 tatggctttttattcctacgtga 34
|||||||||||||||||| ||||
Sbjct: 16 tatggctttttattcctatgtga 38
>34301_dre-mir-135b:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 11 gtatggctttttattccta 29
|||||||||||||||||||
Sbjct: 12 gtatggctttttattccta 30
