miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28454_hsa-mir-138-1:mirbase
Length = 99
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 6 ggcagctggtgttgtgaatcaggccg 31
||||||||||||||||||||||||||
Sbjct: 20 ggcagctggtgttgtgaatcaggccg 45
>33223_bta-mir-138-1:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 6 ggcagctggtgttgtgaatcaggccg 31
||||||||||||||||||||||||||
Sbjct: 18 ggcagctggtgttgtgaatcaggccg 43
>25785_xtr-mir-138:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 13 gcagctggtgttgtgaatcaggccg 37
>25959_gga-mir-138-1:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 20 gcagctggtgttgtgaatcaggccg 44
>25960_gga-mir-138-2:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 7 gcagctggtgttgtgaatcaggccg 31
>26470_tgu-mir-138-2:mirbase
Length = 93
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 9 gcagctggtgttgtgaatcaggccg 33
>27034_eca-mir-138:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 8 gcagctggtgttgtgaatcaggccg 32
>27386_mdo-mir-138:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 7 gcagctggtgttgtgaatcaggccg 31
>27740_mml-mir-138:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 8 gcagctggtgttgtgaatcaggccg 32
>28455_hsa-mir-138-2:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 8 gcagctggtgttgtgaatcaggccg 32
>30229_ptr-mir-138:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 7 gcagctggtgttgtgaatcaggccg 31
>30839_ppy-mir-138-2:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 8 gcagctggtgttgtgaatcaggccg 32
>31495_oan-mir-138-1:mirbase
Length = 137
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 88 gcagctggtgttgtgaatcaggccg 112
>31496_oan-mir-138-2:mirbase
Length = 115
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 25 gcagctggtgttgtgaatcaggccg 49
>32742_rno-mir-138-2:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 7 gcagctggtgttgtgaatcaggccg 31
>33224_bta-mir-138-2:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 7 gcagctggtgttgtgaatcaggccg 31
>34307_dre-mir-138:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 9 gcagctggtgttgtgaatcaggccg 33
>34601_fru-mir-138:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 4 gcagctggtgttgtgaatcaggccg 28
>34748_tni-mir-138:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||||
Sbjct: 4 gcagctggtgttgtgaatcaggccg 28
>26469_tgu-mir-138-1:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 cagctggtgttgtgaatcaggccg 31
||||||||||||||||||||||||
Sbjct: 10 cagctggtgttgtgaatcaggccg 33
>31868_mmu-mir-138-1:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 cagctggtgttgtgaatcaggccg 31
||||||||||||||||||||||||
Sbjct: 22 cagctggtgttgtgaatcaggccg 45
>31869_mmu-mir-138-2:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 cagctggtgttgtgaatcaggccg 31
||||||||||||||||||||||||
Sbjct: 1 cagctggtgttgtgaatcaggccg 24
>32741_rno-mir-138-1:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 cagctggtgttgtgaatcaggccg 31
||||||||||||||||||||||||
Sbjct: 22 cagctggtgttgtgaatcaggccg 45
>25492_pma-mir-138b:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 gcagctggtgttgtgaatcaggc 29
|||||||||||||||||||||||
Sbjct: 13 gcagctggtgttgtgaatcaggc 35
>26711_cfa-mir-138a:mirbase
Length = 62
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 agctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||
Sbjct: 1 agctggtgttgtgaatcaggccg 23
>27035_eca-mir-138-2:mirbase
Length = 59
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 agctggtgttgtgaatcaggccg 31
|||||||||||||||||||||||
Sbjct: 1 agctggtgttgtgaatcaggccg 23
>26712_cfa-mir-138b:mirbase
Length = 69
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 agctggtgttgtgaatcaggccg 31
|||||||||||||||||| ||||
Sbjct: 1 agctggtgttgtgaatcatgccg 23
