miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25959_gga-mir-138-1:mirbase
Length = 96
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 2 ggtgccgtgccgcagctggtgttgtgaatcaggc 35
|||||||||| |||||||||||||||||||||||
Sbjct: 9 ggtgccgtgcagcagctggtgttgtgaatcaggc 42
>31496_oan-mir-138-2:mirbase
Length = 115
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 gtgccgcagctggtgttgtgaatcaggc 35
|||| |||||||||||||||||||||||
Sbjct: 20 gtgctgcagctggtgttgtgaatcaggc 47
>34307_dre-mir-138:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 gtgccgcagctggtgttgtgaatcaggc 35
|||| |||||||||||||||||||||||
Sbjct: 4 gtgctgcagctggtgttgtgaatcaggc 31
>25491_pma-mir-138a:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 7 gcagctggtgttgtgaatcaggc 29
>25785_xtr-mir-138:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 13 gcagctggtgttgtgaatcaggc 35
>25960_gga-mir-138-2:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 7 gcagctggtgttgtgaatcaggc 29
>26470_tgu-mir-138-2:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 9 gcagctggtgttgtgaatcaggc 31
>27034_eca-mir-138:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 8 gcagctggtgttgtgaatcaggc 30
>27386_mdo-mir-138:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 7 gcagctggtgttgtgaatcaggc 29
>27740_mml-mir-138:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 8 gcagctggtgttgtgaatcaggc 30
>28454_hsa-mir-138-1:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 21 gcagctggtgttgtgaatcaggc 43
>28455_hsa-mir-138-2:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 8 gcagctggtgttgtgaatcaggc 30
>30229_ptr-mir-138:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 7 gcagctggtgttgtgaatcaggc 29
>30839_ppy-mir-138-2:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 8 gcagctggtgttgtgaatcaggc 30
>31495_oan-mir-138-1:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 88 gcagctggtgttgtgaatcaggc 110
>32742_rno-mir-138-2:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 7 gcagctggtgttgtgaatcaggc 29
>33223_bta-mir-138-1:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 19 gcagctggtgttgtgaatcaggc 41
>33224_bta-mir-138-2:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 7 gcagctggtgttgtgaatcaggc 29
>34601_fru-mir-138:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 4 gcagctggtgttgtgaatcaggc 26
>34748_tni-mir-138:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 gcagctggtgttgtgaatcaggc 35
|||||||||||||||||||||||
Sbjct: 4 gcagctggtgttgtgaatcaggc 26
>26469_tgu-mir-138-1:mirbase
Length = 73
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 cagctggtgttgtgaatcaggc 35
||||||||||||||||||||||
Sbjct: 10 cagctggtgttgtgaatcaggc 31
>31868_mmu-mir-138-1:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 cagctggtgttgtgaatcaggc 35
||||||||||||||||||||||
Sbjct: 22 cagctggtgttgtgaatcaggc 43
>31869_mmu-mir-138-2:mirbase
Length = 71
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 cagctggtgttgtgaatcaggc 35
||||||||||||||||||||||
Sbjct: 1 cagctggtgttgtgaatcaggc 22
>32741_rno-mir-138-1:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 cagctggtgttgtgaatcaggc 35
||||||||||||||||||||||
Sbjct: 22 cagctggtgttgtgaatcaggc 43
>26711_cfa-mir-138a:mirbase
Length = 62
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 agctggtgttgtgaatcaggc 35
|||||||||||||||||||||
Sbjct: 1 agctggtgttgtgaatcaggc 21
>27035_eca-mir-138-2:mirbase
Length = 59
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 agctggtgttgtgaatcaggc 35
|||||||||||||||||||||
Sbjct: 1 agctggtgttgtgaatcaggc 21
