miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27406_mdo-mir-182:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 7 ctgtgtttggcaatggtagaactcacactgg 37
|||||||||||||||||||||||||||||||
Sbjct: 2 ctgtgtttggcaatggtagaactcacactgg 32
>31513_oan-mir-182:mirbase
Length = 100
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 7 ctgtgtttggcaatggtagaactcacactgg 37
|||||||||||||||||||||||||||||||
Sbjct: 9 ctgtgtttggcaatggtagaactcacactgg 39
>25807_xtr-mir-182:mirbase
Length = 105
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 9 gtgtttggcaatggtagaactcacactgg 37
|||||||||||||||||||||||||||||
Sbjct: 17 gtgtttggcaatggtagaactcacactgg 45
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 tccgggggttctagacttgccaa 71
||||| |||||||||||||||||
Sbjct: 59 tccggtggttctagacttgccaa 81
>34614_fru-mir-182:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 10 tgtttggcaatggtagaactcacactgg 37
||||||||||||||||||||||||||||
Sbjct: 1 tgtttggcaatggtagaactcacactgg 28
>34761_tni-mir-182:mirbase
Length = 67
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 10 tgtttggcaatggtagaactcacactgg 37
||||||||||||||||||||||||||||
Sbjct: 1 tgtttggcaatggtagaactcacactgg 28
>27773_mml-mir-182:mirbase
Length = 112
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 ctgtgtttggcaatggtagaactcacactgg 37
|||| ||||||||||||||||||||||||||
Sbjct: 20 ctgtttttggcaatggtagaactcacactgg 50
>26737_cfa-mir-182:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tttggcaatggtagaactcacactgg 37
||||||||||||||||||||||||||
Sbjct: 18 tttggcaatggtagaactcacactgg 43
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 tccgggggttctagacttgccaa 71
||||| |||||||||||||||||
Sbjct: 57 tccggtggttctagacttgccaa 79
>27063_eca-mir-182:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tttggcaatggtagaactcacactgg 37
||||||||||||||||||||||||||
Sbjct: 7 tttggcaatggtagaactcacactgg 32
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 tccgggggttctagacttgccaa 71
||||| |||||||||||||||||
Sbjct: 46 tccggtggttctagacttgccaa 68
>28489_hsa-mir-182:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tttggcaatggtagaactcacactgg 37
||||||||||||||||||||||||||
Sbjct: 23 tttggcaatggtagaactcacactgg 48
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 tccgggggttctagacttgccaa 71
||||| |||||||||||||||||
Sbjct: 62 tccggtggttctagacttgccaa 84
>30257_ptr-mir-182:mirbase
Length = 109
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tttggcaatggtagaactcacactgg 37
||||||||||||||||||||||||||
Sbjct: 23 tttggcaatggtagaactcacactgg 48
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 tccgggggttctagacttgccaa 71
||||| |||||||||||||||||
Sbjct: 62 tccggtggttctagacttgccaa 84
>30871_ppy-mir-182:mirbase
Length = 112
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tttggcaatggtagaactcacactgg 37
||||||||||||||||||||||||||
Sbjct: 25 tttggcaatggtagaactcacactgg 50
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 tccgggggttctagacttgccaa 71
||||| |||||||||||||||||
Sbjct: 64 tccggtggttctagacttgccaa 86
>33250_bta-mir-182:mirbase
Length = 111
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tttggcaatggtagaactcacactgg 37
||||||||||||||||||||||||||
Sbjct: 25 tttggcaatggtagaactcacactgg 50
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 49 tccgggggttctagacttgccaa 71
||||| |||||||||||||||||
Sbjct: 64 tccggtggttctagacttgccaa 86
>34333_dre-mir-182:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tttggcaatggtagaactcacactgg 37
||||||||||||||||||||||||||
Sbjct: 4 tttggcaatggtagaactcacactgg 29
>31898_mmu-mir-182:mirbase
Length = 75
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tttggcaatggtagaactcacac 34
|||||||||||||||||||||||
Sbjct: 7 tttggcaatggtagaactcacac 29
>32768_rno-mir-182:mirbase
Length = 62
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tttggcaatggtagaactcacac 34
|||||||||||||||||||||||
Sbjct: 35 tttggcaatggtagaactcacac 57
