miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25818_xtr-mir-199a:mirbase
Length = 96
Score = 99.6 bits (50), Expect = 3e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 11 tccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgca 70
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 71 cattggttagactg 84
>25989_gga-mir-199-2:mirbase
Length = 108
Score = 99.6 bits (50), Expect = 3e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 21 tccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgca 80
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 81 cattggttagactg 94
>26496_tgu-mir-199-2:mirbase
Length = 128
Score = 99.6 bits (50), Expect = 3e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 18 tccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgca 77
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 78 cattggttagactg 91
>26497_tgu-mir-199-2:mirbase
Length = 128
Score = 99.6 bits (50), Expect = 3e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 18 tccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgca 77
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 78 cattggttagactg 91
>31527_oan-mir-199:mirbase
Length = 118
Score = 99.6 bits (50), Expect = 3e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>34625_fru-mir-199-1:mirbase
Length = 87
Score = 95.6 bits (48), Expect = 4e-21
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggtt 70
||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcaggattttactggtgtacagtagtctgcacattggtt 74
Query: 71 agac 74
||||
Sbjct: 75 agac 78
>27582_lla-mir-199a:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>27623_sla-mir-199a:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>27795_mml-mir-199a-1:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>28231_mne-mir-199a:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>28326_ggo-mir-199a:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>28514_hsa-mir-199a-2:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>28515_hsa-mir-199a-2:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>30115_ppa-mir-199a:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>30277_ptr-mir-199a-2:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>30892_ppy-mir-199a:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>30893_ppy-mir-199a-2:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>30894_ppy-mir-199a-2:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>31920_mmu-mir-199a-2:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>31921_mmu-mir-199a-2:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>32786_rno-mir-199a:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>32787_rno-mir-199a:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>33272_bta-mir-199a-1:mirbase
Length = 104
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>33273_bta-mir-199a-1:mirbase
Length = 104
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 23 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 82
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 83 cattggttagactg 96
>34029_ssc-mir-199a-1:mirbase
Length = 76
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
|||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1 tccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgca 60
Query: 63 cattggttagactg 76
||||||||||||||
Sbjct: 61 cattggttagactg 74
>34352_dre-mir-199-1:mirbase
Length = 87
Score = 91.7 bits (46), Expect = 7e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggtt 70
||||||||||||||||||||||||||| || || ||||||||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcaggatcatactggtgtacagtagtctgcacattggtt 74
Query: 71 agactg 76
||||||
Sbjct: 75 agactg 80
>34626_fru-mir-199-2:mirbase
Length = 73
Score = 83.8 bits (42), Expect = 2e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggtt 70
||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
Query: 71 ag 72
||
Sbjct: 68 ag 69
>34773_tni-mir-199-2:mirbase
Length = 73
Score = 83.8 bits (42), Expect = 2e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggtt 70
||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 8 cccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggtt 67
Query: 71 ag 72
||
Sbjct: 68 ag 69
>28512_hsa-mir-199a-1:mirbase
Length = 71
Score = 77.8 bits (39), Expect = 1e-15
Identities = 60/65 (92%), Gaps = 4/65 (6%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggagg---ttaatgttgtacagtagtctgcacattg 67
||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatg-tgtacagtagtctgcacattg 64
Query: 68 gttag 72
|||||
Sbjct: 65 gttag 69
>28513_hsa-mir-199a-1:mirbase
Length = 71
Score = 77.8 bits (39), Expect = 1e-15
Identities = 60/65 (92%), Gaps = 4/65 (6%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggagg---ttaatgttgtacagtagtctgcacattg 67
||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatg-tgtacagtagtctgcacattg 64
Query: 68 gttag 72
|||||
Sbjct: 65 gttag 69
>30276_ptr-mir-199a-1:mirbase
Length = 70
Score = 77.8 bits (39), Expect = 1e-15
Identities = 60/65 (92%), Gaps = 4/65 (6%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggagg---ttaatgttgtacagtagtctgcacattg 67
||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatg-tgtacagtagtctgcacattg 64
Query: 68 gttag 72
|||||
Sbjct: 65 gttag 69
>34353_dre-mir-199-2:mirbase
Length = 96
Score = 77.8 bits (39), Expect = 1e-15
Identities = 59/63 (93%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggaggttaatg-ttgtacagtagtctgcacattggt 69
||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||
Sbjct: 30 cccagtgttcagactacctgttcagga-attagtgtttgtacagtagtctgcacattggt 88
Query: 70 tag 72
|||
Sbjct: 89 tag 91
>25988_gga-mir-199-1:mirbase
Length = 94
Score = 75.8 bits (38), Expect = 4e-15
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
||||||| ||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 7 tccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgca 66
Query: 63 cattggttag 72
||||||||||
Sbjct: 67 cattggttag 76
>27417_mdo-mir-199b:mirbase
Length = 89
Score = 75.8 bits (38), Expect = 4e-15
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
||||||| ||||||||| |||||| |||||||||| ||| |||||||||||||||||
Sbjct: 7 tccgtctacccagtgtttagactatctgttcaggactccaatattgtacagtagtctgca 66
Query: 63 cattggttag 72
||||||||||
Sbjct: 67 cattggttag 76
>26757_cfa-mir-199-2:mirbase
Length = 59
Score = 69.9 bits (35), Expect = 2e-13
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 12 ccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggtt 70
|||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 59
>27083_eca-mir-199a:mirbase
Length = 61
Score = 69.9 bits (35), Expect = 2e-13
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggt 69
||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggt 59
>27084_eca-mir-199a:mirbase
Length = 61
Score = 69.9 bits (35), Expect = 2e-13
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggt 69
||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggt 59
>27796_mml-mir-199a-2:mirbase
Length = 71
Score = 69.9 bits (35), Expect = 2e-13
Identities = 59/65 (90%), Gaps = 4/65 (6%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggagg---ttaatgttgtacagtagtctgcacattg 67
||||||||||||||||||||||||||||| | || | |||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaacg-tgtacagtagtctgcacattg 64
Query: 68 gttag 72
|||||
Sbjct: 65 gttag 69
>27797_mml-mir-199a-2:mirbase
Length = 71
Score = 69.9 bits (35), Expect = 2e-13
Identities = 59/65 (90%), Gaps = 4/65 (6%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggagg---ttaatgttgtacagtagtctgcacattg 67
||||||||||||||||||||||||||||| | || | |||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaacg-tgtacagtagtctgcacattg 64
Query: 68 gttag 72
|||||
Sbjct: 65 gttag 69
>33274_bta-mir-199a-2:mirbase
Length = 71
Score = 69.9 bits (35), Expect = 2e-13
Identities = 59/65 (90%), Gaps = 4/65 (6%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggagg---ttaatgttgtacagtagtctgcacattg 67
|||||||||||||||||||||||||| || | |||| |||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagggggctctgaatg-tgtacagtagtctgcacattg 64
Query: 68 gttag 72
|||||
Sbjct: 65 gttag 69
>33275_bta-mir-199a-2:mirbase
Length = 71
Score = 69.9 bits (35), Expect = 2e-13
Identities = 59/65 (90%), Gaps = 4/65 (6%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggagg---ttaatgttgtacagtagtctgcacattg 67
|||||||||||||||||||||||||| || | |||| |||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagggggctctgaatg-tgtacagtagtctgcacattg 64
Query: 68 gttag 72
|||||
Sbjct: 65 gttag 69
>33793_bta-mir-3604-1:mirbase
Length = 78
Score = 69.9 bits (35), Expect = 2e-13
Identities = 59/65 (90%), Gaps = 4/65 (6%)
Strand = Plus / Minus
Query: 11 cccagtgttcagactacctgttcaggaggtt---aatgttgtacagtagtctgcacattg 67
|||||||||||||||||||||||||| || | ||||| ||||||||||||||||||||
Sbjct: 70 cccagtgttcagactacctgttcagggggctctgaatgt-gtacagtagtctgcacattg 12
Query: 68 gttag 72
|||||
Sbjct: 11 gttag 7
>34030_ssc-mir-199a-2:mirbase
Length = 80
Score = 69.9 bits (35), Expect = 2e-13
Identities = 59/65 (90%), Gaps = 4/65 (6%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggagg---ttaatgttgtacagtagtctgcacattg 67
|||||||||||||||||||||||||| || | |||| |||||||||||||||||||||
Sbjct: 10 cccagtgttcagactacctgttcagggggctctgaatg-tgtacagtagtctgcacattg 68
Query: 68 gttag 72
|||||
Sbjct: 69 gttag 73
>34031_ssc-mir-199a-2:mirbase
Length = 80
Score = 69.9 bits (35), Expect = 2e-13
Identities = 59/65 (90%), Gaps = 4/65 (6%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggagg---ttaatgttgtacagtagtctgcacattg 67
|||||||||||||||||||||||||| || | |||| |||||||||||||||||||||
Sbjct: 10 cccagtgttcagactacctgttcagggggctctgaatg-tgtacagtagtctgcacattg 68
Query: 68 gttag 72
|||||
Sbjct: 69 gttag 73
>26494_tgu-mir-199-1:mirbase
Length = 71
Score = 67.9 bits (34), Expect = 1e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggtt 70
||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
Query: 71 ag 72
||
Sbjct: 62 ag 63
>26495_tgu-mir-199-1:mirbase
Length = 71
Score = 67.9 bits (34), Expect = 1e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggtt 70
||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
Query: 71 ag 72
||
Sbjct: 62 ag 63
>31922_mmu-mir-199b:mirbase
Length = 110
Score = 67.9 bits (34), Expect = 1e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
||||||| ||||||||| ||||||||||||||||| | |||||||||||||||||
Sbjct: 18 tccgtctacccagtgtttagactacctgttcaggactcccaaattgtacagtagtctgca 77
Query: 63 cattggttag 72
||||||||||
Sbjct: 78 cattggttag 87
>34772_tni-mir-199-1:mirbase
Length = 86
Score = 67.9 bits (34), Expect = 1e-12
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggtt 70
|||||||||||||||||||||||| || || ||||||||||||||||||||||||
Sbjct: 14 cccagtgttcagactacctgttcattgtcatactggtgtacagtagtctgcacattggtt 73
Query: 71 agactg 76
||||||
Sbjct: 74 agactg 79
>34627_fru-mir-199-3:mirbase
Length = 99
Score = 65.9 bits (33), Expect = 4e-12
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggtt 70
|||||||||||||||||||||||| || ||| | || |||||||||||||||||||||
Sbjct: 17 cccagtgttcagactacctgttcatcagactaaagctgaacagtagtctgcacattggtt 76
Query: 71 a 71
|
Sbjct: 77 a 77
>26756_cfa-mir-199-1:mirbase
Length = 61
Score = 63.9 bits (32), Expect = 2e-11
Identities = 56/62 (90%), Gaps = 4/62 (6%)
Strand = Plus / Plus
Query: 12 ccagtgttcagactacctgttcaggagg---ttaatgttgtacagtagtctgcacattgg 68
||||||||||||||||||||||||| || | |||| ||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttcagggggctctgaatg-tgtacagtagtctgcacattgg 59
Query: 69 tt 70
||
Sbjct: 60 tt 61
>31918_mmu-mir-199a-1:mirbase
Length = 70
Score = 61.9 bits (31), Expect = 6e-11
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggagg-ttaatgttgtacagtagtctgcacattggt 69
||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctgggacatgtacagtagtctgcacattggt 65
Query: 70 tag 72
|||
Sbjct: 66 tag 68
>31919_mmu-mir-199a-1:mirbase
Length = 70
Score = 61.9 bits (31), Expect = 6e-11
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggagg-ttaatgttgtacagtagtctgcacattggt 69
||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctgggacatgtacagtagtctgcacattggt 65
Query: 70 tag 72
|||
Sbjct: 66 tag 68
>25518_pma-mir-199b:mirbase
Length = 80
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 47 tgtacagtagtctgcacattggttagactg 76
||||||||||||||||||||||||||||||
Sbjct: 48 tgtacagtagtctgcacattggttagactg 77
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 5 cgtctccccagtgttcagactacctgttca 34
||||| |||||||||| |||||||||||||
Sbjct: 5 cgtctgcccagtgttctgactacctgttca 34
>28516_hsa-mir-199b:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 2e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
||||||| ||||||||| |||||| |||||||||| | |||||||||||||||||
Sbjct: 18 tccgtctacccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgca 77
Query: 63 cattggttag 72
||||||||||
Sbjct: 78 cattggttag 87
>28517_hsa-mir-199b:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 2e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
||||||| ||||||||| |||||| |||||||||| | |||||||||||||||||
Sbjct: 18 tccgtctacccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgca 77
Query: 63 cattggttag 72
||||||||||
Sbjct: 78 cattggttag 87
>30278_ptr-mir-199b:mirbase
Length = 109
Score = 60.0 bits (30), Expect = 2e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
||||||| ||||||||| |||||| |||||||||| | |||||||||||||||||
Sbjct: 18 tccgtctacccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgca 77
Query: 63 cattggttag 72
||||||||||
Sbjct: 78 cattggttag 87
>33276_bta-mir-199b:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 2e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
||||||| ||||||||| |||||| |||||||||| | |||||||||||||||||
Sbjct: 8 tccgtctacccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgca 67
Query: 63 cattggttag 72
||||||||||
Sbjct: 68 cattggttag 77
>33794_bta-mir-3604-2:mirbase
Length = 73
Score = 58.0 bits (29), Expect = 9e-10
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 4 ccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcac 63
|||||| ||||||||| |||||| |||||||||| | ||||||||||||||||||
Sbjct: 73 ccgtctacccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcac 14
Query: 64 attggttag 72
|||||||||
Sbjct: 13 attggttag 5
>34032_ssc-mir-199b:mirbase
Length = 74
Score = 58.0 bits (29), Expect = 9e-10
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 4 ccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcac 63
|||||| ||||||||| |||||| |||||||||| | ||||||||||||||||||
Sbjct: 1 ccgtctacccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcac 60
Query: 64 attggttag 72
|||||||||
Sbjct: 61 attggttag 69
>34774_tni-mir-199-3:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 9e-10
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggtt 70
|||||||||||||||||||||||| || | | | || |||||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcatcagactcaagctgaacagtagtctgcacattggtt 74
Query: 71 a 71
|
Sbjct: 75 a 75
>27085_eca-mir-199b:mirbase
Length = 69
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 46 ttgtacagtagtctgcacattggttag 72
|||||||||||||||||||||||||||
Sbjct: 41 ttgtacagtagtctgcacattggttag 67
>27086_eca-mir-199b:mirbase
Length = 69
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 46 ttgtacagtagtctgcacattggttag 72
|||||||||||||||||||||||||||
Sbjct: 41 ttgtacagtagtctgcacattggttag 67
>26758_cfa-mir-199-3:mirbase
Length = 59
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 ttgtacagtagtctgcacattggtt 70
|||||||||||||||||||||||||
Sbjct: 35 ttgtacagtagtctgcacattggtt 59
>34354_dre-mir-199-3:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 cccagtgttcagactacctgttca 34
||||||||||||||||||||||||
Sbjct: 16 cccagtgttcagactacctgttca 39
>30895_ppy-mir-199b:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 46 ttgtacagtagtctgcacattggttag 72
|||||||||| ||||||||||||||||
Sbjct: 62 ttgtacagtattctgcacattggttag 88
>30896_ppy-mir-199b:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 46 ttgtacagtagtctgcacattggttag 72
|||||||||| ||||||||||||||||
Sbjct: 62 ttgtacagtattctgcacattggttag 88
>33277_bta-mir-199c:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 tgtacagtagtctgcacattgg 68
||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattgg 65
>25819_xtr-mir-199b:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 ccccagtgttcagactacctgttc 33
|||||||||||||||||| |||||
Sbjct: 30 ccccagtgttcagactacgtgttc 53
>24847_cin-mir-199:mirbase
Length = 102
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 50 acagtagtctgcacattgg 68
|||||||||||||||||||
Sbjct: 66 acagtagtctgcacattgg 84
