miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25532_pma-mir-218a-2:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 ccttgtgcttgatctaaccatgtgct 36
||||||||||||||||||||||||||
Sbjct: 11 ccttgtgcttgatctaaccatgtgct 36
>31946_mmu-mir-218-1:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtgct 36
||||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtgct 48
>32810_rno-mir-218a-1:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtgct 36
||||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtgct 48
>32812_rno-mir-218b:mirbase
Length = 114
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 13 ttgtgcttgatctaaccatgtgct 36
||||||||||||||||||||||||
Sbjct: 86 ttgtgcttgatctaaccatgtgct 63
>34375_dre-mir-218a-1:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 cttgtgcttgatctaaccatgtgc 35
||||||||||||||||||||||||
Sbjct: 10 cttgtgcttgatctaaccatgtgc 33
>34640_fru-mir-218a-1:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 cttgtgcttgatctaaccatgtg 34
|||||||||||||||||||||||
Sbjct: 10 cttgtgcttgatctaaccatgtg 32
>34788_tni-mir-218a-1:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 cttgtgcttgatctaaccatgtg 34
|||||||||||||||||||||||
Sbjct: 10 cttgtgcttgatctaaccatgtg 32
>25837_xtr-mir-218-1:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 24 ttgtgcttgatctaaccatgtg 45
>25838_xtr-mir-218-2:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 12 ttgtgcttgatctaaccatgtg 33
>26007_gga-mir-218-1:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 24 ttgtgcttgatctaaccatgtg 45
>26008_gga-mir-218-2:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 12 ttgtgcttgatctaaccatgtg 33
>26514_tgu-mir-218-1:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 11 ttgtgcttgatctaaccatgtg 32
>26515_tgu-mir-218-2:mirbase
Length = 131
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 11 ttgtgcttgatctaaccatgtg 32
>26778_cfa-mir-218-1:mirbase
Length = 64
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 1 ttgtgcttgatctaaccatgtg 22
>26779_cfa-mir-218-2:mirbase
Length = 64
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 1 ttgtgcttgatctaaccatgtg 22
>27102_eca-mir-218:mirbase
Length = 62
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 1 ttgtgcttgatctaaccatgtg 22
>27103_eca-mir-218-2:mirbase
Length = 63
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 1 ttgtgcttgatctaaccatgtg 22
>27432_mdo-mir-218:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 24 ttgtgcttgatctaaccatgtg 45
>27520_age-mir-218:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>27584_lla-mir-218-1:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>27585_lla-mir-218-2:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>27626_sla-mir-218-1:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>27627_sla-mir-218-2:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>27814_mml-mir-218-1:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 20 ttgtgcttgatctaaccatgtg 41
>27815_mml-mir-218-2:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>28238_mne-mir-218-1:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>28239_mne-mir-218-2:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>28334_ggo-mir-218:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>28536_hsa-mir-218-1:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>28537_hsa-mir-218-2:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>30121_ppa-mir-218-1:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>30122_ppa-mir-218-2:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>30294_ptr-mir-218-1:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>30295_ptr-mir-218-2:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>30912_ppy-mir-218-1:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>30913_ppy-mir-218-2:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>31409_lca-mir-218:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>31538_oan-mir-218:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 31 ttgtgcttgatctaaccatgtg 52
>31539_oan-mir-218-2:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 12 ttgtgcttgatctaaccatgtg 33
>31947_mmu-mir-218-2:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>32811_rno-mir-218a-2:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>33295_bta-mir-218-1:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 25 ttgtgcttgatctaaccatgtg 46
>33296_bta-mir-218-2:mirbase
Length = 62
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 2 ttgtgcttgatctaaccatgtg 23
>34043_ssc-mir-218:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 11 ttgtgcttgatctaaccatgtg 32
>34044_ssc-mir-218b:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 11 ttgtgcttgatctaaccatgtg 32
>34376_dre-mir-218a-2:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 14 ttgtgcttgatctaaccatgtg 35
>34641_fru-mir-218a-2:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 11 ttgtgcttgatctaaccatgtg 32
>34789_tni-mir-218a-2:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatgtg 34
||||||||||||||||||||||
Sbjct: 11 ttgtgcttgatctaaccatgtg 32
>25533_pma-mir-218b:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatg 32
||||||||||||||||||||
Sbjct: 15 ttgtgcttgatctaaccatg 34
>34377_dre-mir-218b:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatg 32
||||||||||||||||||||
Sbjct: 11 ttgtgcttgatctaaccatg 30
>34642_fru-mir-218b:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatg 32
||||||||||||||||||||
Sbjct: 11 ttgtgcttgatctaaccatg 30
>34790_tni-mir-218b:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 ttgtgcttgatctaaccatg 32
||||||||||||||||||||
Sbjct: 11 ttgtgcttgatctaaccatg 30
