miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31952_mmu-mir-222:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctctggtg 84
|||||||||||| || |||||||||||||||||
Sbjct: 45 cagcagctacatctggctactgggtctctggtg 77
>27107_eca-mir-222:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 1e-06
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 26 ccagtgtagatcctgcctcgtgcacacagcagctacatttgactactgggtctctg 81
||||||||||||||| || || | |||||||||||| || ||||||||||||||
Sbjct: 39 ccagtgtagatcctgtcttttgtaatcagcagctacatctggctactgggtctctg 94
>26011_gga-mir-222-1:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctctg 81
|||||||||||| || ||||||||||||||
Sbjct: 53 cagcagctacatctggctactgggtctctg 82
>26012_gga-mir-222-2:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctctg 81
|||||||||||| || ||||||||||||||
Sbjct: 53 cagcagctacatctggctactgggtctctg 82
>26518_tgu-mir-222-1:mirbase
Length = 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctctg 81
|||||||||||| || ||||||||||||||
Sbjct: 37 cagcagctacatctggctactgggtctctg 66
>26519_tgu-mir-222-2:mirbase
Length = 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctctg 81
|||||||||||| || ||||||||||||||
Sbjct: 37 cagcagctacatctggctactgggtctctg 66
>27435_mdo-mir-222a:mirbase
Length = 68
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctctg 81
|||||||||||| || ||||||||||||||
Sbjct: 23 cagcagctacatctggctactgggtctctg 52
>27820_mml-mir-222:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctctg 81
|||||||||||| || ||||||||||||||
Sbjct: 65 cagcagctacatctggctactgggtctctg 94
>28543_hsa-mir-222:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctctg 81
|||||||||||| || ||||||||||||||
Sbjct: 65 cagcagctacatctggctactgggtctctg 94
>30917_ppy-mir-222:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctctg 81
|||||||||||| || ||||||||||||||
Sbjct: 65 cagcagctacatctggctactgggtctctg 94
>31542_oan-mir-222a:mirbase
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctctg 81
|||||||||||| || ||||||||||||||
Sbjct: 60 cagcagctacatctggctactgggtctctg 89
>32818_rno-mir-222:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctctg 81
|||||||||||| || ||||||||||||||
Sbjct: 58 cagcagctacatctggctactgggtctctg 87
>34382_dre-mir-222:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctctg 81
|||||||||||| || ||||||||||||||
Sbjct: 64 cagcagctacatctggctactgggtctctg 93
>34646_fru-mir-222:mirbase
Length = 69
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctctg 81
|||||||||||| || ||||||||||||||
Sbjct: 40 cagcagctacatctggctactgggtctctg 69
>34794_tni-mir-222:mirbase
Length = 68
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctctg 81
|||||||||||| || ||||||||||||||
Sbjct: 39 cagcagctacatctggctactgggtctctg 68
>25841_xtr-mir-222:mirbase
Length = 64
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 52 cagcagctacatttgactactgggtctct 80
|||||||||||| || |||||||||||||
Sbjct: 35 cagcagctacatctggctactgggtctct 63
>26783_cfa-mir-222:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 26 ccagtgtagatcctgcctcgtgcacacagcagctacatttgactactgggtctctg 81
||||||||||||||| || || | ||| |||||||| || ||||||||||||||
Sbjct: 19 ccagtgtagatcctgtcttttgtaatcagtagctacatctggctactgggtctctg 74
>27521_age-mir-222:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 26 ccagtgtagatcctgcctcgtgcacacagcagctacatttgactactgggtctctg 81
||||||||||||||| || || | ||| |||||||| || ||||||||||||||
Sbjct: 39 ccagtgtagatcctgtcttttgtaatcagtagctacatctggctactgggtctctg 94
>33302_bta-mir-222:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 26 ccagtgtagatcctgcctcgtgcacacagcagctacatttgactactgggtctctg 81
||||||||||||||| || || | ||| |||||||| || ||||||||||||||
Sbjct: 39 ccagtgtagatcctgtcttttgtaatcagtagctacatctggctactgggtctctg 94
