miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31980_mmu-mir-301a:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 57 gagcagtgcaattgtattgtcaaagcttccg 87
|||||||||||| ||||||||||||| ||||
Sbjct: 48 gagcagtgcaatagtattgtcaaagcatccg 78
>26521_tgu-mir-301:mirbase
Length = 73
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 57 gagcagtgcaattgtattgtcaaagc 82
|||||||||||| |||||||||||||
Sbjct: 38 gagcagtgcaatagtattgtcaaagc 63
>26522_tgu-mir-301:mirbase
Length = 73
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 57 gagcagtgcaattgtattgtcaaagc 82
|||||||||||| |||||||||||||
Sbjct: 38 gagcagtgcaatagtattgtcaaagc 63
>32837_rno-mir-301a:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagcttccg 87
||||||||||| ||||||||||||| ||||
Sbjct: 59 agcagtgcaatagtattgtcaaagcatccg 88
>25843_xtr-mir-301-1:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 48 agcagtgcaatagtattgtcaaagc 72
>25844_xtr-mir-301-2:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 42 agcagtgcaatagtattgtcaaagc 66
>26015_gga-mir-301b:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 52 agcagtgcaatagtattgtcaaagc 76
>26016_gga-mir-301b:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 52 agcagtgcaatagtattgtcaaagc 76
>26788_cfa-mir-301a:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 48 agcagtgcaatagtattgtcaaagc 72
>27112_eca-mir-301a:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagc 73
>27437_mdo-mir-301:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagc 73
>27829_mml-mir-301a:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagc 73
>28553_hsa-mir-301a:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagc 73
>30308_ptr-mir-301a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagc 73
>31545_oan-mir-301:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 71 agcagtgcaatagtattgtcaaagc 95
>31981_mmu-mir-301b:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 53 agcagtgcaatggtattgtcaaagc 77
>32838_rno-mir-301b:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 43 agcagtgcaatggtattgtcaaagc 67
>33308_bta-mir-301a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagc 73
>34385_dre-mir-301a-1:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagc 73
>34386_dre-mir-301a-2:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 agcagtgcaattgtattgtcaaagc 82
||||||||||| |||||||||||||
Sbjct: 49 agcagtgcaatagtattgtcaaagc 73
