miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34478_dre-mir-456:mirbase
Length = 85
Score = 69.9 bits (35), Expect = 3e-13
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 10 gtgtgcaggcatctttccagcctacacgtggggtcctgattctgcaggctggttagatgg 69
|||||||||||||||||||| ||||| |||| | || ||||||||||||||||||||
Sbjct: 10 gtgtgcaggcatctttccagtctacatgtggatccaggagtctgcaggctggttagatgg 69
Query: 70 ttgtcac 76
|||||||
Sbjct: 70 ttgtcac 76
>26034_gga-mir-456:mirbase
Length = 112
Score = 67.9 bits (34), Expect = 1e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 14 gcaggcatctttccagcctacacgtggggtcctgattctgcaggctggttagatggttgt 73
||||||||||| ||||||||| |||| |||| | ||||||||||||||||||||||||
Sbjct: 31 gcaggcatcttctcagcctacatgtggattcctaaatctgcaggctggttagatggttgt 90
Query: 74 ca 75
||
Sbjct: 91 ca 92
>26535_tgu-mir-456:mirbase
Length = 79
Score = 67.9 bits (34), Expect = 1e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 14 gcaggcatctttccagcctacacgtggggtcctgattctgcaggctggttagatggttgt 73
||||||||||| ||||||||| |||| |||| | ||||||||||||||||||||||||
Sbjct: 11 gcaggcatcttctcagcctacatgtggattcctaaatctgcaggctggttagatggttgt 70
Query: 74 ca 75
||
Sbjct: 71 ca 72
