miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25699_xtr-mir-15c:mirbase
Length = 74
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 ctttgaggtgatctagcagcacatcatggtttgtagaaacaaggagatacagaccattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctttgaggtgatctagcagcacatcatggtttgtagaaacaaggagatacagaccattct 60
Query: 61 gagctgcctcttga 74
||||||||||||||
Sbjct: 61 gagctgcctcttga 74
>26398_tgu-mir-15c:mirbase
Length = 82
Score = 99.6 bits (50), Expect = 3e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 1 ctttgaggtgatctagcagcacatcatggtttgtagaaacaaggagatacagaccattct 60
|||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ctttgaggagatgtagcagcacatcatggtttgtagggacaaggagatacagaccattct 60
Query: 61 gagctgcctc 70
| ||||||||
Sbjct: 61 gggctgcctc 70
>25893_gga-mir-15c:mirbase
Length = 76
Score = 93.7 bits (47), Expect = 2e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 4 tgaggtgatctagcagcacatcatggtttgtagaaacaaggagatacagaccattctgag 63
||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 1 tgaggagatgtagcagcacatcatggtttgtagggacaaggagatacagaccattctggg 60
Query: 64 ctgcctc 70
|||||||
Sbjct: 61 ctgcctc 67
>31427_oan-mir-15c:mirbase
Length = 116
Score = 89.7 bits (45), Expect = 2e-19
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggtttgtagaaacaaggagatacagaccattctgagctgcctc 70
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 28 tagcagcacatcatggtttgtagggacaaggagatacagaccattctgggctgcctc 84
>25892_gga-mir-15b:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tctagcagcacatcatggtttg 33
||||||||||||||||||||||
Sbjct: 17 tctagcagcacatcatggtttg 38
>34204_dre-mir-15b:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggtttgta 35
||||||||||||||||||||||
Sbjct: 39 tagcagcacatcatggtttgta 60
>26397_tgu-mir-15b:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggtttg 33
||||||||||||||||||||
Sbjct: 11 tagcagcacatcatggtttg 30
>31426_oan-mir-15b:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggtttg 33
||||||||||||||||||||
Sbjct: 31 tagcagcacatcatggtttg 50
>26624_cfa-mir-15b:mirbase
Length = 60
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 1 tagcagcacatcatggttt 19
>26946_eca-mir-15b:mirbase
Length = 64
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 4 tagcagcacatcatggttt 22
>27479_age-mir-15b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 20 tagcagcacatcatggttt 38
>27540_lla-mir-15b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 20 tagcagcacatcatggttt 38
>27651_mml-mir-15b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 20 tagcagcacatcatggttt 38
>28171_mne-mir-15b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 20 tagcagcacatcatggttt 38
>28259_ggo-mir-15b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 20 tagcagcacatcatggttt 38
>28361_hsa-mir-15b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 20 tagcagcacatcatggttt 38
>30043_ppa-mir-15b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 20 tagcagcacatcatggttt 38
>30147_ptr-mir-15b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 20 tagcagcacatcatggttt 38
>30752_ppy-mir-15b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 20 tagcagcacatcatggttt 38
>31776_mmu-mir-15b:mirbase
Length = 64
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 4 tagcagcacatcatggttt 22
>32658_rno-mir-15b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 20 tagcagcacatcatggttt 38
>33129_bta-mir-15b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 20 tagcagcacatcatggttt 38
>33912_ssc-mir-15b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 tagcagcacatcatggttt 32
|||||||||||||||||||
Sbjct: 20 tagcagcacatcatggttt 38
