miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25827_xtr-mir-205a:mirbase
Length = 86
Score = 163 bits (82), Expect = 2e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1 ccacgtgtcctgctgtccttcattccaccggagtctgtctcatacataatcagatttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccacgtgtcctgctgtccttcattccaccggagtctgtctcatacataatcagatttcag 60
Query: 61 tagagtgaagcacaagaggcatgtag 86
| ||||||||||||||||||||||||
Sbjct: 61 tggagtgaagcacaagaggcatgtag 86
>27423_mdo-mir-205a:mirbase
Length = 72
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagcac 73
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 3 tgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtgaagcat 62
Query: 74 aagaggcatg 83
||||||||||
Sbjct: 63 aagaggcatg 72
>31531_oan-mir-205:mirbase
Length = 108
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagcac 73
||||||||||||||||||||||||| || ||| ||||||||||||||| |||||||||||
Sbjct: 29 tgtccttcattccaccggagtctgtttcgtacctaatcagatttcagtggagtgaagcac 88
Query: 74 aagaggcatg 83
||||||||||
Sbjct: 89 aagaggcatg 98
>25997_gga-mir-205a:mirbase
Length = 96
Score = 99.6 bits (50), Expect = 3e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagcac 73
|||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||||||
Sbjct: 20 tgtccttcattccaccggagtctgtctcgtacctaaccagatttcagtggagtgaagcac 79
Query: 74 aagaggcatg 83
||||| ||||
Sbjct: 80 aagagacatg 89
>27583_lla-mir-205:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 2e-17
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagcac 73
|||||||||||||||||||||||||||||||| || ||||||||||| |||||||| |
Sbjct: 32 tgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaagttc 91
Query: 74 aagaggcatg 83
| ||||||||
Sbjct: 92 aggaggcatg 101
>27802_mml-mir-205:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 2e-17
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagcac 73
|||||||||||||||||||||||||||||||| || ||||||||||| |||||||| |
Sbjct: 32 tgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaagttc 91
Query: 74 aagaggcatg 83
| ||||||||
Sbjct: 92 aggaggcatg 101
>28233_mne-mir-205:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 2e-17
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagcac 73
|||||||||||||||||||||||||||||||| || ||||||||||| |||||||| |
Sbjct: 32 tgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaagttc 91
Query: 74 aagaggcatg 83
| ||||||||
Sbjct: 92 aggaggcatg 101
>28329_ggo-mir-205:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 2e-17
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagcac 73
|||||||||||||||||||||||||||||||| || ||||||||||| |||||||| |
Sbjct: 32 tgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaagttc 91
Query: 74 aagaggcatg 83
| ||||||||
Sbjct: 92 aggaggcatg 101
>28524_hsa-mir-205:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 2e-17
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagcac 73
|||||||||||||||||||||||||||||||| || ||||||||||| |||||||| |
Sbjct: 32 tgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaagttc 91
Query: 74 aagaggcatg 83
| ||||||||
Sbjct: 92 aggaggcatg 101
>30117_ppa-mir-205:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 2e-17
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagcac 73
|||||||||||||||||||||||||||||||| || ||||||||||| |||||||| |
Sbjct: 32 tgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaagttc 91
Query: 74 aagaggcatg 83
| ||||||||
Sbjct: 92 aggaggcatg 101
>30283_ptr-mir-205:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 2e-17
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagcac 73
|||||||||||||||||||||||||||||||| || ||||||||||| |||||||| |
Sbjct: 32 tgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaagttc 91
Query: 74 aagaggcatg 83
| ||||||||
Sbjct: 92 aggaggcatg 101
>30901_ppy-mir-205:mirbase
Length = 109
Score = 83.8 bits (42), Expect = 2e-17
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagcac 73
|||||||||||||||||||||||||||||||| || ||||||||||| |||||||| |
Sbjct: 32 tgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaagttc 91
Query: 74 aagaggcatg 83
| ||||||||
Sbjct: 92 aggaggcatg 101
>34035_ssc-mir-205:mirbase
Length = 69
Score = 83.8 bits (42), Expect = 2e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagc 71
|||||||||||||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 5 tgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaagc 62
>27091_eca-mir-205:mirbase
Length = 69
Score = 81.8 bits (41), Expect = 7e-17
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaag 70
|||||||||||||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 5 tgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaag 61
>27518_age-mir-205:mirbase
Length = 109
Score = 81.8 bits (41), Expect = 7e-17
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaag 70
|||||||||||||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 32 tgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaag 88
>26765_cfa-mir-205:mirbase
Length = 69
Score = 73.8 bits (37), Expect = 2e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaag 70
|||||||||||||||||||||||||||| ||| || ||||||||||| ||||||||
Sbjct: 5 tgtccttcattccaccggagtctgtctcgtacccaaccagatttcagtggagtgaag 61
>32795_rno-mir-205:mirbase
Length = 108
Score = 73.8 bits (37), Expect = 2e-14
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 7 gtcctgctgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagt 66
||||| |||||||||||||||||||||||||||| || | || ||||||||||| ||||
Sbjct: 24 gtcctcctgtccttcattccaccggagtctgtcttatgc-caaccagatttcagtggagt 82
Query: 67 gaagcacaagaggcatg 83
||||| || ||||||||
Sbjct: 83 gaagctcaggaggcatg 99
>33283_bta-mir-205:mirbase
Length = 69
Score = 73.8 bits (37), Expect = 2e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaag 70
|||||||||||||||||||||||||||| ||| || ||||||||||| ||||||||
Sbjct: 5 tgtccttcattccaccggagtctgtctcgtacccaaccagatttcagtggagtgaag 61
>31931_mmu-mir-205:mirbase
Length = 68
Score = 60.0 bits (30), Expect = 3e-10
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagc 71
||||||||||||||||||||||||||| || | || ||||||||||| |||||||||
Sbjct: 5 tgtccttcattccaccggagtctgtcttatgc-caaccagatttcagtggagtgaagc 61
>25523_pma-mir-205a:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 gtccttcattccaccggagtctgtc 39
|||||||||||||||||||||||||
Sbjct: 9 gtccttcattccaccggagtctgtc 33
>25828_xtr-mir-205b:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 ctgctgtccttcattccaccgga 32
|||||||||||||||||||||||
Sbjct: 3 ctgctgtccttcattccaccgga 25
>34363_dre-mir-205:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tccttcattccaccggagtctgt 38
|||||||||||||||||||||||
Sbjct: 19 tccttcattccaccggagtctgt 41
>34633_fru-mir-205:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tccttcattccaccggagtctgt 38
|||||||||||||||||||||||
Sbjct: 10 tccttcattccaccggagtctgt 32
>34781_tni-mir-205:mirbase
Length = 66
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 tccttcattccaccggagtctgt 38
|||||||||||||||||||||||
Sbjct: 3 tccttcattccaccggagtctgt 25
>25524_pma-mir-205b:mirbase
Length = 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 ccttcattccaccggagtctgt 38
||||||||||||||||||||||
Sbjct: 8 ccttcattccaccggagtctgt 29
>25998_gga-mir-205b:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 tcctgctgtccttcattccaccggagtctgtc 39
||||| || |||||||||||||||| ||||||
Sbjct: 18 tcctgatgcccttcattccaccggaatctgtc 49
>26508_tgu-mir-205:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 tcctgctgtccttcattccaccggagtctgtc 39
||||| || |||||||||||||||| ||||||
Sbjct: 5 tcctggtgcccttcattccaccggaatctgtc 36
