miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26047_gga-mir-1306:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 11 tccaccacctcccctgcaaacgtccagtgacgcagaggtaatggacgttggctctggtgg 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccaccacctcccctgcaaacgtccagtgacgcagaggtaatggacgttggctctggtgg 60
Query: 71 tgatggaca 79
|||||||||
Sbjct: 61 tgatggaca 69
>32403_mmu-mir-1306:mirbase
Length = 79
Score = 137 bits (69), Expect = 1e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 10 ctccaccacctcccctgcaaacgtccagtgacgcagaggtaatggacgttggctctggtg 69
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5 ctccaccacctcccctgcaaacgtccagtgatgcagaggtaatggacgttggctctggtg 64
Query: 70 gtgatggacagtc 82
|||||||||||||
Sbjct: 65 gtgatggacagtc 77
>32404_mmu-mir-1306:mirbase
Length = 79
Score = 137 bits (69), Expect = 1e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 10 ctccaccacctcccctgcaaacgtccagtgacgcagaggtaatggacgttggctctggtg 69
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5 ctccaccacctcccctgcaaacgtccagtgatgcagaggtaatggacgttggctctggtg 64
Query: 70 gtgatggacagtc 82
|||||||||||||
Sbjct: 65 gtgatggacagtc 77
>34145_ssc-mir-1306:mirbase
Length = 80
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 10 ctccaccacctcccctgcaaacgtccagtgacgcagaggtaatggacgttggctctggtg 69
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3 ctccaccacctcccctgcaaacgtccagtgatgcagaggtaatggacgttggctctggtg 62
Query: 70 gtgatggacag 80
|||||||||||
Sbjct: 63 gtgatggacag 73
>34146_ssc-mir-1306:mirbase
Length = 80
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 10 ctccaccacctcccctgcaaacgtccagtgacgcagaggtaatggacgttggctctggtg 69
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3 ctccaccacctcccctgcaaacgtccagtgatgcagaggtaatggacgttggctctggtg 62
Query: 70 gtgatggacag 80
|||||||||||
Sbjct: 63 gtgatggacag 73
>29173_hsa-mir-1306:mirbase
Length = 85
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 10 ctccaccacctcccctgcaaacgtccagtgacgcagaggtaatggacgttggctctggtg 69
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 10 ctccaccacctcccctgcaaacgtccagtggtgcagaggtaatggacgttggctctggtg 69
Query: 70 gtgatggacagtc 82
|||||||||||||
Sbjct: 70 gtgatggacagtc 82
>30723_ptr-mir-1306:mirbase
Length = 84
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 10 ctccaccacctcccctgcaaacgtccagtgacgcagaggtaatggacgttggctctggtg 69
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 9 ctccaccacctcccctgcaaacgtccagtggtgcagaggtaatggacgttggctctggtg 68
Query: 70 gtgatggacagtc 82
|||||||||||||
Sbjct: 69 gtgatggacagtc 81
>31364_ppy-mir-1306:mirbase
Length = 85
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 10 ctccaccacctcccctgcaaacgtccagtgacgcagaggtaatggacgttggctctggtg 69
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 10 ctccaccacctcccctgcaaacgtccagtggtgcagaggtaatggacgttggctctggtg 69
Query: 70 gtgatggacagtc 82
|||||||||||||
Sbjct: 70 gtgatggacagtc 82
>26914_cfa-mir-1306:mirbase
Length = 58
Score = 107 bits (54), Expect = 1e-24
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 15 ccacctcccctgcaaacgtccagtgacgcagaggtaatggacgttggctctggtggtg 72
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 ccacctcccctgcaaacgtccagtgatgcagaggtaatggacgttggctctggtggtg 58
>33487_bta-mir-1306:mirbase
Length = 58
Score = 107 bits (54), Expect = 1e-24
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 15 ccacctcccctgcaaacgtccagtgacgcagaggtaatggacgttggctctggtggtg 72
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 ccacctcccctgcaaacgtccagtgatgcagaggtaatggacgttggctctggtggtg 58
