miRNEST 2.0, an integrative microRNA resource :: BLAST
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 208 bits (105), Expect = 8e-55
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 15 caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggacat 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggacat 60
Query: 75 acttgtggttttcttgcaagttgtgcagttgttgcctcaagcttg 119
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acttgtggttttcttgcaagttgtgcagttgttgcctcaagcttg 105
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 186 bits (94), Expect = 3e-48
Identities = 104/106 (98%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 15 caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcagga-ca 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggatca 60
Query: 74 tacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttg 119
||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 106
>42089_osa-MIR444d:mirbase
Length = 143
Score = 145 bits (73), Expect = 9e-36
Identities = 114/125 (91%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 5 atggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaat 64
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |
Sbjct: 12 atggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcatt 71
Query: 65 tgcaggacatacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 124
| | || ||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 72 ag-atgat-tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcc 129
Query: 125 tccct 129
|||||
Sbjct: 130 tccct 134
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 84 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 124
|||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 57 tttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 57
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82
>42088_osa-MIR444d:mirbase
Length = 143
Score = 145 bits (73), Expect = 9e-36
Identities = 114/125 (91%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 5 atggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaat 64
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |
Sbjct: 12 atggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcatt 71
Query: 65 tgcaggacatacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 124
| | || ||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 72 ag-atgat-tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcc 129
Query: 125 tccct 129
|||||
Sbjct: 130 tccct 134
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 84 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 124
|||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 57 tttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 57
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82
>42087_osa-MIR444d:mirbase
Length = 143
Score = 145 bits (73), Expect = 9e-36
Identities = 114/125 (91%), Gaps = 2/125 (1%)
Strand = Plus / Plus
Query: 5 atggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaat 64
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |
Sbjct: 12 atggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcatt 71
Query: 65 tgcaggacatacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 124
| | || ||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 72 ag-atgat-tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcc 129
Query: 125 tccct 129
|||||
Sbjct: 130 tccct 134
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 84 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 124
|||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 57 tttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 57
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82
>42084_osa-MIR444b:mirbase
Length = 138
Score = 91.7 bits (46), Expect = 1e-19
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 83 ttttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttg 132
|||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 85 ttttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttg 134
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 83 ttttcttgcaagttgtgcagttgttgcctcaagcttg 119
|||||||||||| |||||||||| |||| ||||||||
Sbjct: 54 ttttcttgcaagatgtgcagttgctgccacaagcttg 18
>42083_osa-MIR444b:mirbase
Length = 138
Score = 91.7 bits (46), Expect = 1e-19
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 83 ttttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttg 132
|||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 85 ttttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttg 134
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 83 ttttcttgcaagttgtgcagttgttgcctcaagcttg 119
|||||||||||| |||||||||| |||| ||||||||
Sbjct: 54 ttttcttgcaagatgtgcagttgctgccacaagcttg 18
>42648_tae-MIR444:mirbase
Length = 426
Score = 89.7 bits (45), Expect = 5e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 72 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcccttt 131
||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcccttt 181
Query: 132 g 132
|
Sbjct: 182 g 182
Score = 56.0 bits (28), Expect = 7e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 57
|||| ||||| |||||||| |||||||| ||||||||||||| |||||
Sbjct: 174 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaagccacaa 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1 gcatatggtggcaccaagcatgaggcaggaactgcattacttgc 44
|||| ||| |||||| ||||||||||| |||||||||||||||
Sbjct: 13 gcatgtggcggcaccgagcatgaggcaacaactgcattacttgc 56
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 89.7 bits (45), Expect = 5e-19
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 7 ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattg 66
||||||||||||||||||||| ||||||||||||| |||| |||| |||||||| || |
Sbjct: 1 ggtggcaccaagcatgaggcaacaactgcattactttcaaggaagttacaaaatctatgg 60
Query: 67 caggacatacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 126
|||| | ||| |||||||||||||||||||||| || ||||||||||||| |||
Sbjct: 61 gtcttcataatcgtgactttcttgcaagttgtgcagttgctgtctcaagcttgctgactc 120
Query: 127 c 127
|
Sbjct: 121 c 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 15 caagcatgaggcaggaactgcattacttgcaagaaagtcac 55
||||| |||| ||| ||||||| |||||||||||||||||
Sbjct: 113 caagcttgagacagcaactgcacaacttgcaagaaagtcac 73
>42649_tae-MIR444b:mirbase
Length = 162
Score = 87.7 bits (44), Expect = 2e-18
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 72 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 127
||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 98 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 153
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1 gcatatggtggcaccaagcatgaggcaggaactgcattacttgc 44
|||| ||| |||||| ||||||||||| |||||||||||||||
Sbjct: 6 gcatgtggcggcaccgagcatgaggcaacaactgcattacttgc 49
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 57
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 150 ggcagcaagcttgaggcagcaactgcacgacttgcaagaaagccacaa 103
>42091_osa-MIR444f:mirbase
Length = 154
Score = 87.7 bits (44), Expect = 2e-18
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 84 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 127
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 5 atggtggcaccaagcatgaggcaggaactgcattacttgcaag 47
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 atggtggcaccaagcatgaggttacaactgcattacttgcaag 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtca 54
|||| ||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 150 ggcagcaagcttgaggcaacaactgcacaacttgcaagaaagtca 106
>42086_osa-MIR444c:mirbase
Length = 138
Score = 83.8 bits (42), Expect = 3e-17
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 83 ttttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttg 132
|||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 83 ttttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttg 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 83 ttttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 127
|||||||||||| | |||||||| || ||| ||||||| ||||||
Sbjct: 58 ttttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>42085_osa-MIR444c:mirbase
Length = 138
Score = 83.8 bits (42), Expect = 3e-17
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 83 ttttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttg 132
|||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 83 ttttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttg 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 83 ttttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 127
|||||||||||| | |||||||| || ||| ||||||| ||||||
Sbjct: 58 ttttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 83.8 bits (42), Expect = 3e-17
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 72 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttgctgcct 125
||||||||||| |||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 57
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 113 ggcagcaagcttgaggcagcaactgcacgacttgcaagaaagccacaa 66
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 75.8 bits (38), Expect = 7e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 83 ttttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 124
|||||||||||||||||||||||||| |||||||||||||||
Sbjct: 67 ttttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 83 ttttcttgcaagttgtgcagttgttgcctcaagcttg 119
|||||||||||| | |||||||| |||||| ||||||
Sbjct: 42 ttttcttgcaagatatgcagttgctgcctctagcttg 6
>42082_osa-MIR444a:mirbase
Length = 131
Score = 69.9 bits (35), Expect = 4e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 85 ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 127
|||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgcaagaa 49
|||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 120 ggcagcaagcttgaggcagcaactgcataacttgcaagaa 81
>42081_osa-MIR444a:mirbase
Length = 131
Score = 69.9 bits (35), Expect = 4e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 85 ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 127
|||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 10 ggcaccaagcatgaggcaggaactgcattacttgcaagaa 49
|||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 120 ggcagcaagcttgaggcagcaactgcataacttgcaagaa 81
>42090_osa-MIR444e:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 90 gcaagttgtgcagttgttgcctcaagcttgctgcct 125
||||||| |||||||| |||||||||||| ||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagcttactgcct 126
>41805_bdi-MIR444:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 92 aagttgtgcagttgttgcctcaagcttgctgc 123
||||| |||||||| |||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
