miRNEST 2.0, an integrative microRNA resource :: BLAST
>25654_xla-mir-1b:mirbase
Length = 59
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgta 62
|||||||||||||||||||||||
Sbjct: 37 tatggaatgttaagaagtatgta 59
>25686_xtr-mir-1b:mirbase
Length = 62
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgta 62
|||||||||||||||||||||||
Sbjct: 40 tatggaatgttaagaagtatgta 62
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 acatacttcttcatatgcccata 23
||||||||||| |||||||||||
Sbjct: 3 acatacttctttatatgcccata 25
>26937_eca-mir-1-2:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 acatacttcttcatatgcccatatgga 27
||||||||||| |||||||||||||||
Sbjct: 10 acatacttctttatatgcccatatgga 36
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 47 tatggaatgtaaagaagtatgtat 70
>27640_mml-mir-1-1:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 acatacttcttcatatgcccatatgga 27
||||||||||| |||||||||||||||
Sbjct: 10 acatacttctttatatgcccatatgga 36
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtatc 64
|||||||||| ||||||||||||||
Sbjct: 47 tatggaatgtaaagaagtatgtatc 71
>28350_hsa-mir-1-1:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 acatacttcttcatatgcccatatgga 27
||||||||||| |||||||||||||||
Sbjct: 7 acatacttctttatatgcccatatgga 33
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtatc 64
|||||||||| ||||||||||||||
Sbjct: 44 tatggaatgtaaagaagtatgtatc 68
>30137_ptr-mir-1-1:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 acatacttcttcatatgcccatatgga 27
||||||||||| |||||||||||||||
Sbjct: 6 acatacttctttatatgcccatatgga 32
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtatc 64
|||||||||| ||||||||||||||
Sbjct: 43 tatggaatgtaaagaagtatgtatc 67
>30742_ppy-mir-1-1:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 acatacttcttcatatgcccatatgga 27
||||||||||| |||||||||||||||
Sbjct: 7 acatacttctttatatgcccatatgga 33
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtatc 64
|||||||||| ||||||||||||||
Sbjct: 44 tatggaatgtaaagaagtatgtatc 68
>26613_cfa-mir-1-1:mirbase
Length = 59
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2 catacttcttcatatgcccatatgga 27
|||||||||| |||||||||||||||
Sbjct: 1 catacttctttatatgcccatatgga 26
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgta 62
|||||||||| ||||||||||||
Sbjct: 37 tatggaatgtaaagaagtatgta 59
>38595_ppc-mir-1:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 38 gttatggaatgttaagaagtatgta 62
|||||||||||| ||||||||||||
Sbjct: 63 gttatggaatgtaaagaagtatgta 87
>25685_xtr-mir-1a-2:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtatc 64
|||||||||| ||||||||||||||
Sbjct: 45 tatggaatgtaaagaagtatgtatc 69
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 acatacttcttcatatgcccatatgga 27
||||||||||| ||||| |||||||||
Sbjct: 7 acatacttctttatatgtccatatgga 33
>25879_gga-mir-1a-1:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 acatacttcttcatatgcccatatg 25
||||||||||| |||||||||||||
Sbjct: 7 acatacttctttatatgcccatatg 31
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 44 tatggaatgtaaagaagtatgtat 67
>26388_tgu-mir-1-1:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 acatacttcttcatatgcccatatg 25
||||||||||| |||||||||||||
Sbjct: 2 acatacttctttatatgcccatatg 26
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 39 tatggaatgtaaagaagtatgtat 62
>31417_oan-mir-1b:mirbase
Length = 62
Score = 42.1 bits (21), Expect = 4e-05
Identities = 46/53 (86%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 5 acttcttcatatgcccatatggagtcggccggcgttatggaatgttaagaagt 57
||||||||||||||||||| |||| | ||| | ||||||||||||||||||
Sbjct: 5 acttcttcatatgcccatagggag-ctgcccgaactatggaatgttaagaagt 56
>31763_mmu-mir-1a-1:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 acatacttcttcatatgcccatatg 25
||||||||||| |||||||||||||
Sbjct: 10 acatacttctttatatgcccatatg 34
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 47 tatggaatgtaaagaagtatgtat 70
>34184_dre-mir-1-1:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 acatacttcttcatatgcccatatg 25
||||||||||| |||||||||||||
Sbjct: 23 acatacttctttatatgcccatatg 47
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtatc 64
|||||||||| ||||||||||||||
Sbjct: 60 tatggaatgtaaagaagtatgtatc 84
>38847_lgi-mir-1:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 54 tatggaatgtaaagaagtatgtat 77
>24644_bfl-mir-1:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 54 tatggaatgtaaagaagtatgtat 77
>25684_xtr-mir-1a-1:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 51 tatggaatgtaaagaagtatgtat 74
>25880_gga-mir-1a-2:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 51 tatggaatgtaaagaagtatgtat 74
>26389_tgu-mir-1-2:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 39 tatggaatgtaaagaagtatgtat 62
>26936_eca-mir-1:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 48 tatggaatgtaaagaagtatgtat 71
>27327_mdo-mir-1:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 51 tatggaatgtaaagaagtatgtat 74
>27641_mml-mir-1-2:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 44 tatggaatgtaaagaagtatgtat 67
>28351_hsa-mir-1-2:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 51 tatggaatgtaaagaagtatgtat 74
>30036_ppa-mir-1:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 51 tatggaatgtaaagaagtatgtat 74
>30138_ptr-mir-1-2:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 51 tatggaatgtaaagaagtatgtat 74
>31416_oan-mir-1a:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 60 tatggaatgtaaagaagtatgtat 83
>31764_mmu-mir-1a-2:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 45 tatggaatgtaaagaagtatgtat 68
>31765_mmu-mir-1b:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 63 tatggaatgtaaagaagtatgtat 40
>31766_mmu-mir-1b:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 63 tatggaatgtaaagaagtatgtat 40
>33119_bta-mir-1-1:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 47 tatggaatgtaaagaagtatgtat 70
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 acatacttcttcatatgcccatatgga 27
||||||||||| || ||||||||||||
Sbjct: 10 acatacttctttatgtgcccatatgga 36
>33120_bta-mir-1-2:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 51 tatggaatgtaaagaagtatgtat 74
>33905_ssc-mir-1:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 62 tatggaatgtaaagaagtatgtat 85
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 acatacttcttcatatgcccatatgga 27
||||||||||| || ||||||||||||
Sbjct: 25 acatacttctttatgtgcccatatgga 51
>34185_dre-mir-1-2:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 52 tatggaatgtaaagaagtatgtat 75
>34535_fru-mir-1:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 47 tatggaatgtaaagaagtatgtat 70
>34683_tni-mir-1:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 55 tatggaatgtaaagaagtatgtat 78
>34806_spu-mir-1:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgtat 63
|||||||||| |||||||||||||
Sbjct: 58 tatggaatgtaaagaagtatgtat 81
>38719_cte-mir-1:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgta 62
|||||||||| ||||||||||||
Sbjct: 57 tatggaatgtaaagaagtatgta 79
>38486_crm-mir-1:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgta 62
|||||||||| ||||||||||||
Sbjct: 53 tatggaatgtaaagaagtatgta 75
>25346_odi-mir-1c:mirbase
Length = 102
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 39 ttatggaatgttaagaagtatgt 61
||||||||||| |||||||||||
Sbjct: 63 ttatggaatgtaaagaagtatgt 85
>25417_pma-mir-1c:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgta 62
|||||||||| ||||||||||||
Sbjct: 55 tatggaatgtaaagaagtatgta 77
>26614_cfa-mir-1-2:mirbase
Length = 59
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgta 62
|||||||||| ||||||||||||
Sbjct: 37 tatggaatgtaaagaagtatgta 59
>38126_cbr-mir-1:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgta 62
|||||||||| ||||||||||||
Sbjct: 54 tatggaatgtaaagaagtatgta 76
>38266_cel-mir-1:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 40 tatggaatgttaagaagtatgta 62
|||||||||| ||||||||||||
Sbjct: 59 tatggaatgtaaagaagtatgta 81
