miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25883_gga-mir-7-1:mirbase
Length = 109
Score = 159 bits (80), Expect = 5e-40
Identities = 99/104 (95%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 7 ttggtctagttctgtgtggaagactagtgatttt-gttgtttttagataattaaattgac 65
Query: 67 aacaaatcacagtctaccatatggcacagactatgcctctacag 110
||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 66 aacaaatcacagtctgccatatggcacagatcatgcctctacag 109
>27642_mml-mir-7-1:mirbase
Length = 110
Score = 159 bits (80), Expect = 5e-40
Identities = 99/104 (95%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 8 ttggcctagttctgtgtggaagactagtgatttt-gttgtttttagataactaaattgac 66
Query: 67 aacaaatcacagtctaccatatggcacagactatgcctctacag 110
||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 67 aacaaatcacagtctgccatatggcacaggccatgcctctacag 110
>28166_mne-mir-7-1:mirbase
Length = 110
Score = 159 bits (80), Expect = 5e-40
Identities = 99/104 (95%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 8 ttggcctagttctgtgtggaagactagtgatttt-gttgtttttagataactaaattgac 66
Query: 67 aacaaatcacagtctaccatatggcacagactatgcctctacag 110
||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 67 aacaaatcacagtctgccatatggcacaggccatgcctctacag 110
>33906_ssc-mir-7:mirbase
Length = 109
Score = 159 bits (80), Expect = 5e-40
Identities = 99/104 (95%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 7 ttggtctagttctgtgtggaagactagtgatttt-gttgtttttagataactaaatcgac 65
Query: 67 aacaaatcacagtctaccatatggcacagactatgcctctacag 110
||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 66 aacaaatcacagtctgccatatggcacaggccatgcctctacag 109
>31418_oan-mir-7-1:mirbase
Length = 139
Score = 155 bits (78), Expect = 8e-39
Identities = 103/110 (93%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 1 tggacattggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaa 60
||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 28 tggacgttggtctagttctgtgtggaagactagtgatttt-gttgtttgtagataactaa 86
Query: 61 attgacaacaaatcacagtctaccatatggcacagactatgcctctacag 110
|| ||||||||||| |||||| ||||||||||||||| ||||||||||||
Sbjct: 87 atcgacaacaaatcgcagtctgccatatggcacagaccatgcctctacag 136
>27537_lla-mir-7:mirbase
Length = 110
Score = 151 bits (76), Expect = 1e-37
Identities = 98/104 (94%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 8 ttggcctagttctgtgtggaagactagtgatttt-gttgtttttagataactaaatcgac 66
Query: 67 aacaaatcacagtctaccatatggcacagactatgcctctacag 110
||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 67 aacaaatcacagtctgccatatggcacaggccatgcctctacag 110
>28252_ggo-mir-7-1:mirbase
Length = 110
Score = 151 bits (76), Expect = 1e-37
Identities = 98/104 (94%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 8 ttggcctagttctgtgtggaagactagtgatttt-gttgtttttagataactaaatcgac 66
Query: 67 aacaaatcacagtctaccatatggcacagactatgcctctacag 110
||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 67 aacaaatcacagtctgccatatggcacaggccatgcctctacag 110
>28352_hsa-mir-7-1:mirbase
Length = 110
Score = 151 bits (76), Expect = 1e-37
Identities = 98/104 (94%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 8 ttggcctagttctgtgtggaagactagtgatttt-gttgtttttagataactaaatcgac 66
Query: 67 aacaaatcacagtctaccatatggcacagactatgcctctacag 110
||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 67 aacaaatcacagtctgccatatggcacaggccatgcctctacag 110
>30037_ppa-mir-7-1:mirbase
Length = 110
Score = 151 bits (76), Expect = 1e-37
Identities = 98/104 (94%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 8 ttggcctagttctgtgtggaagactagtgatttt-gttgtttttagataactaaatcgac 66
Query: 67 aacaaatcacagtctaccatatggcacagactatgcctctacag 110
||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 67 aacaaatcacagtctgccatatggcacaggccatgcctctacag 110
>30743_ppy-mir-7-1:mirbase
Length = 110
Score = 151 bits (76), Expect = 1e-37
Identities = 98/104 (94%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 8 ttggcctagttctgtgtggaagactagtgatttt-gttgtttttagataactaaatcgac 66
Query: 67 aacaaatcacagtctaccatatggcacagactatgcctctacag 110
||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 67 aacaaatcacagtctgccatatggcacaggccatgcctctacag 110
>33123_bta-mir-7-2:mirbase
Length = 109
Score = 151 bits (76), Expect = 1e-37
Identities = 98/104 (94%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
|||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||
Sbjct: 7 ttggtctagttctgtgtggaagactagtgatttt-gttgtttttagataactgaatcgac 65
Query: 67 aacaaatcacagtctaccatatggcacagactatgcctctacag 110
||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 66 aacaaatcacagtctgccatatggcacaggccatgcctctacag 109
>30139_ptr-mir-7-1:mirbase
Length = 109
Score = 149 bits (75), Expect = 5e-37
Identities = 97/103 (94%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 8 ttggcctagttctgtgtggaagactagtgatttt-gttgtttttagataactaaatcgac 66
Query: 67 aacaaatcacagtctaccatatggcacagactatgcctctaca 109
||||||||||||||| ||||||||||||| | |||||||||||
Sbjct: 67 aacaaatcacagtctgccatatggcacaggccatgcctctaca 109
>27586_sla-mir-7:mirbase
Length = 110
Score = 147 bits (74), Expect = 2e-36
Identities = 102/110 (92%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 1 tggacattggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaa 60
|||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 2 tggatattggcctagttctgtgtggaagactagtgatttt-gttgtttttagataattaa 60
Query: 61 attgacaacaaatcacagtctaccatatggcacagactatgcctctacag 110
|| |||||||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 61 atcgacaacaaatcacagtctgccatatggcacaggccatgcctctacag 110
>25687_xtr-mir-7-1:mirbase
Length = 108
Score = 141 bits (71), Expect = 1e-34
Identities = 96/103 (93%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
||||| |||||||||||||||||||||||||||| |||||||||||||||| | ||||||
Sbjct: 7 ttggtttagttctgtgtggaagactagtgatttt-gttgtttttagataacaacattgac 65
Query: 67 aacaaatcacagtctaccatatggcacagactatgcctctaca 109
|||||||| |||||| ||||||||||||||| |||||||||||
Sbjct: 66 aacaaatcgcagtctgccatatggcacagaccatgcctctaca 108
>26940_eca-mir-7-3:mirbase
Length = 88
Score = 135 bits (68), Expect = 7e-33
Identities = 84/88 (95%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 8 tggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgaca 67
||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||
Sbjct: 1 tggtctagttctgtgtggaagactagtgatttt-gttgtttgtagataactaaatcgaca 59
Query: 68 acaaatcacagtctaccatatggcacag 95
|||||||||||||| |||||||||||||
Sbjct: 60 acaaatcacagtctgccatatggcacag 87
>31767_mmu-mir-7a-1:mirbase
Length = 108
Score = 129 bits (65), Expect = 5e-31
Identities = 84/89 (94%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 8 ttggcctagttctgtgtggaagactagtgatttt-gttgtttttagataactaaaacgac 66
Query: 67 aacaaatcacagtctaccatatggcacag 95
||||||||||||||| |||||||||||||
Sbjct: 67 aacaaatcacagtctgccatatggcacag 95
>32649_rno-mir-7a-1:mirbase
Length = 97
Score = 121 bits (61), Expect = 1e-28
Identities = 83/89 (93%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 3 ttggcctagttctgtgtggaagactagtgatttt-gttgtttttagataactaagacgac 61
Query: 67 aacaaatcacagtctaccatatggcacag 95
||||||||||||||| |||||||||||||
Sbjct: 62 aacaaatcacagtctgccatatggcacag 90
>26390_tgu-mir-7-1:mirbase
Length = 73
Score = 115 bits (58), Expect = 7e-27
Identities = 71/74 (95%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 13 tagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgacaacaaa 72
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 1 tagttctgtgtggaagactagtgatttt-gttgttttttgataactaaattgacaacaaa 59
Query: 73 tcacagtctaccat 86
||||||||| ||||
Sbjct: 60 tcacagtctgccat 73
>27328_mdo-mir-7:mirbase
Length = 77
Score = 109 bits (55), Expect = 4e-25
Identities = 71/75 (94%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 7 ttggtctagttctgtgtggaagactagtgatttttgttgtttttagataactaaattgac 66
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 1 ttggcctagttctgtgtggaagactagtgatttt-gttgtttttagataactaaaacgac 59
Query: 67 aacaaatcacagtct 81
|||||||||||||||
Sbjct: 60 aacaaatcacagtct 74
>26615_cfa-mir-7-1:mirbase
Length = 64
Score = 97.6 bits (49), Expect = 2e-21
Identities = 62/65 (95%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 23 tggaagactagtgatttttgttgtttttagataactaaattgacaacaaatcacagtcta 82
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 tggaagactagtgatttt-gttgtttttagataactaaatcgacaacaaatcacagtctg 59
Query: 83 ccata 87
|||||
Sbjct: 60 ccata 64
>34536_fru-mir-7:mirbase
Length = 91
Score = 71.9 bits (36), Expect = 9e-14
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 18 ctgtgtggaagactagtgatttttgttgtttttagataactaaattgacaacaaatcaca 77
||||||||||||||||||| ||||||||||||||| || | || |||||||||||||||
Sbjct: 13 ctgtgtggaagactagtga-ttttgttgtttttagttagatcaactgacaacaaatcaca 71
Query: 78 gtct 81
||||
Sbjct: 72 gtct 75
>26617_cfa-mir-7-3:mirbase
Length = 88
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 tggtctagttctgtgtggaagactagtgatttt 40
||||||||| |||||||||||||||||||||||
Sbjct: 10 tggtctagtgctgtgtggaagactagtgatttt 42
>26939_eca-mir-7-2:mirbase
Length = 84
Score = 58.0 bits (29), Expect = 1e-09
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 9 ggtctagttctgtgtggaagactagtgatttttgttgtttt 49
|||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 1 ggtctagtgctgtgtggaagactagtga-ttttgttgtttt 40
>27644_mml-mir-7-3:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 tggtctagttctgtgtggaagactagtgatttt 40
||||||||| |||||||||||||||||||||||
Sbjct: 16 tggtctagtgctgtgtggaagactagtgatttt 48
>28254_ggo-mir-7-3:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 tggtctagttctgtgtggaagactagtgatttt 40
||||||||| |||||||||||||||||||||||
Sbjct: 16 tggtctagtgctgtgtggaagactagtgatttt 48
>28354_hsa-mir-7-3:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 tggtctagttctgtgtggaagactagtgatttt 40
||||||||| |||||||||||||||||||||||
Sbjct: 16 tggtctagtgctgtgtggaagactagtgatttt 48
>30039_ppa-mir-7-3:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 tggtctagttctgtgtggaagactagtgatttt 40
||||||||| |||||||||||||||||||||||
Sbjct: 16 tggtctagtgctgtgtggaagactagtgatttt 48
>30141_ptr-mir-7-3:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 tggtctagttctgtgtggaagactagtgatttt 40
||||||||| |||||||||||||||||||||||
Sbjct: 16 tggtctagtgctgtgtggaagactagtgatttt 48
>30745_ppy-mir-7-3:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 tggtctagttctgtgtggaagactagtgatttt 40
||||||||| |||||||||||||||||||||||
Sbjct: 16 tggtctagtgctgtgtggaagactagtgatttt 48
>33121_bta-mir-7:mirbase
Length = 82
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 tggtctagttctgtgtggaagactagtgatttt 40
||||||||| |||||||||||||||||||||||
Sbjct: 16 tggtctagtgctgtgtggaagactagtgatttt 48
>34189_dre-mir-7b:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 9e-08
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 16 ttctgtgtggaagactagtgatttttgttgtttttagataactaaattgacaacaaatca 75
|||||||||||||||| |||| |||||||||| |||| || | || |||||||||||||
Sbjct: 16 ttctgtgtggaagacttgtga-ttttgttgttgttagttagatgaagtgacaacaaatca 74
Query: 76 cagtct 81
| ||||
Sbjct: 75 cggtct 80
>25885_gga-mir-7-3:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 tggtctagttctgtgtggaagactagtgatttt 40
|||||| | ||||||||||||||||||||||||
Sbjct: 4 tggtctggctctgtgtggaagactagtgatttt 36
>26393_tgu-mir-7-4:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tctgtgtggaagactagtgatttt 40
||||||||||||||||||||||||
Sbjct: 5 tctgtgtggaagactagtgatttt 28
>24645_bfl-mir-7:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 gttctgtgtggaagactagtgatttt 40
||||||| ||||||||||||||||||
Sbjct: 3 gttctgtatggaagactagtgatttt 28
>37693_tca-mir-7:mirbase
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgtgtggaagactagtgatttt 40
||||||||||||||||||||||
Sbjct: 7 tgtgtggaagactagtgatttt 28
>37694_tca-mir-7:mirbase
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tgtgtggaagactagtgatttt 40
||||||||||||||||||||||
Sbjct: 7 tgtgtggaagactagtgatttt 28
>25689_xtr-mir-7-3:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 8e-05
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Plus
Query: 23 tggaagactagtgatttttgttgttttta 51
|||||||||||||| ||||||||||||||
Sbjct: 12 tggaagactagtga-ttttgttgttttta 39
>38727_cte-mir-7:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgtggaagactagtgatttt 40
||||||||||||||||||||
Sbjct: 19 tgtggaagactagtgatttt 38
>25688_xtr-mir-7-2:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgtggaagactagtgatttt 40
||||||||||||||||||||
Sbjct: 20 tgtggaagactagtgatttt 39
>26391_tgu-mir-7-2:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgtggaagactagtgatttt 40
||||||||||||||||||||
Sbjct: 9 tgtggaagactagtgatttt 28
>26392_tgu-mir-7-3:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgtggaagactagtgatttt 40
||||||||||||||||||||
Sbjct: 9 tgtggaagactagtgatttt 28
>34186_dre-mir-7a-1:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tgtggaagactagtgatttt 40
||||||||||||||||||||
Sbjct: 1 tgtggaagactagtgatttt 20
>35517_bmo-mir-7:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 27/28 (96%), Gaps = 1/28 (3%)
Strand = Plus / Plus
Query: 23 tggaagactagtgatttttgttgttttt 50
|||||||||||||| |||||||||||||
Sbjct: 15 tggaagactagtga-ttttgttgttttt 41
