miRNEST 2.0, an integrative microRNA resource :: BLAST
>40043_ath-MIR168a:mirbase
Length = 138
Score = 87.7 bits (44), Expect = 2e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 77 tggtttgtgagcagggattggatcccgccttgcatcaattgaatcgga 124
|||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 80 tggtttgtgagcagggattggatcccgccttgcatcaactgaatcgga 127
>39832_aly-MIR168a:mirbase
Length = 155
Score = 87.7 bits (44), Expect = 2e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 77 tggtttgtgagcagggattggatcccgccttgcatcaattgaatcgga 124
|||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 86 tggtttgtgagcagggattggatcccgccttgcatcaactgaatcgga 133
>40271_bna-MIR168:mirbase
Length = 133
Score = 60.0 bits (30), Expect = 4e-10
Identities = 85/102 (83%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 21 tcgcttggtgcaggtcgagaactaattgtctaacacatccacgaagttttacttgct-gg 79
||||||||||||||||| ||||| |||| || |||| ||||| | ||| | || | ||
Sbjct: 18 tcgcttggtgcaggtcgggaactgattggctgacaccgccacgtggctttccatggttgg 77
Query: 80 tttgtgagcagggattggatcccgccttgcatcaattgaatc 121
|||||||||||||| ||||||||||||| ||||| ||||||
Sbjct: 78 cttgtgagcagggatcggatcccgccttgtatcaagtgaatc 119
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 93 attggatcccgccttgcatcaattgaatcggag 125
|||||||||||||||||||||| ||||||||||
Sbjct: 103 attggatcccgccttgcatcaactgaatcggag 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 attcgcttggtgcaggtcgagaact 43
||||||||||||||||||| |||||
Sbjct: 9 attcgcttggtgcaggtcgggaact 33
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 93 attggatcccgccttgcatcaattgaatcggag 125
|||||||||||||||||||||| ||||||||||
Sbjct: 127 attggatcccgccttgcatcaactgaatcggag 159
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 gattcgcttggtgcaggtcgagaact 43
|||||||||||||||||||| |||||
Sbjct: 8 gattcgcttggtgcaggtcgggaact 33
>41215_crt-MIR168:mirbase
Length = 201
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 93 attggatcccgccttgcatcaattgaatcggag 125
|||||||||||||||||||||| ||||||||||
Sbjct: 136 attggatcccgccttgcatcaactgaatcggag 168
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 attcgcttggtgcaggtcgagaactaattg 48
||||||||||||||||||| ||||| ||||
Sbjct: 19 attcgcttggtgcaggtcgggaactgattg 48
>41210_ccl-MIR168:mirbase
Length = 176
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 93 attggatcccgccttgcatcaattgaatcggag 125
|||||||||||||||||||||| ||||||||||
Sbjct: 135 attggatcccgccttgcatcaactgaatcggag 167
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 attcgcttggtgcaggtcgagaactaattg 48
||||||||||||||||||| ||||| ||||
Sbjct: 18 attcgcttggtgcaggtcgggaactgattg 47
>41101_tcc-MIR168:mirbase
Length = 167
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 93 attggatcccgccttgcatcaattgaatcggag 125
|||||||||||||||||||||| ||||||||||
Sbjct: 120 attggatcccgccttgcatcaactgaatcggag 152
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 attcgcttggtgcaggtcgagaactaattg 48
||||||||||||||||||| ||||| ||||
Sbjct: 19 attcgcttggtgcaggtcgggaactgattg 48
>40448_gma-MIR168:mirbase
Length = 125
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 93 attggatcccgccttgcatcaattgaatcggag 125
|||||||||||||||||||||| ||||||||||
Sbjct: 81 attggatcccgccttgcatcaactgaatcggag 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 attcgcttggtgcaggtcgagaac 42
||||||||||||||||||| ||||
Sbjct: 17 attcgcttggtgcaggtcgggaac 40
>42742_zma-MIR168b:mirbase
Length = 104
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||||||| ||||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggagcc 94
>40044_ath-MIR168b:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 14 ctcggattcgcttggtgcaggtcgagaactaattg 48
|||||||||||||||||||||||| ||||| ||||
Sbjct: 12 ctcggattcgcttggtgcaggtcgggaactgattg 46
>40355_rco-MIR168:mirbase
Length = 131
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 93 attggatcccgccttgcatcaattgaatcg 122
|||||||||||||||||||||| |||||||
Sbjct: 99 attggatcccgccttgcatcaactgaatcg 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 attcgcttggtgcaggtcgagaactaattg 48
||||||||||||||||||| ||||| ||||
Sbjct: 4 attcgcttggtgcaggtcgggaactgattg 33
>39833_aly-MIR168b:mirbase
Length = 176
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 14 ctcggattcgcttggtgcaggtcgagaact 43
|||||||||||||||||||||||| |||||
Sbjct: 36 ctcggattcgcttggtgcaggtcgggaact 65
>41596_vvi-MIR168:mirbase
Length = 132
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 97 gatcccgccttgcatcaattgaatcggag 125
|||||||||||||||||| ||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggag 127
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 attcgcttggtgcaggtcgagaac 42
||||||||||||||||||| ||||
Sbjct: 9 attcgcttggtgcaggtcgggaac 32
>42741_zma-MIR168a:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggagcc 94
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 60 ggatcccgccttgcaccaagtgaatcggagcc 91
>42460_sof-MIR168b:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggagcc 93
>42459_sof-MIR168a:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggagcc 94
>41962_osa-MIR168a:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggagcc 86
>41961_osa-MIR168a:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggagcc 86
>41888_hvu-MIR168:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggagcc 97
>41887_hvu-MIR168:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggagcc 97
>41753_bdi-MIR168:mirbase
Length = 136
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 96 ggatcccgccttgcatcaattgaatcggagcc 127
||||||||||||||| ||| ||||||||||||
Sbjct: 75 ggatcccgccttgcaccaagtgaatcggagcc 106
