miRNEST 2.0, an integrative microRNA resource :: BLAST
>26486_tgu-mir-181b-2:mirbase
Length = 74
Score = 131 bits (66), Expect = 9e-32
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 6 ggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatcaa 65
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 1 ggctgcaatcaacattcattgctgtcggtgggttttcatttctatcaactcactgaccaa 60
Query: 66 tgaatgcaaactgc 79
||||||||||||||
Sbjct: 61 tgaatgcaaactgc 74
>27062_eca-mir-181b:mirbase
Length = 89
Score = 99.6 bits (50), Expect = 3e-22
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 4 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 63
||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 4 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 63
Query: 64 aatgaatgcaaactgcggacca 85
||||||||||||||||||||||
Sbjct: 64 aatgaatgcaaactgcggacca 85
>28486_hsa-mir-181b-2:mirbase
Length = 89
Score = 99.6 bits (50), Expect = 3e-22
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 4 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 63
||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 4 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 63
Query: 64 aatgaatgcaaactgcggacca 85
||||||||||||||||||||||
Sbjct: 64 aatgaatgcaaactgcggacca 85
>31895_mmu-mir-181b-2:mirbase
Length = 89
Score = 99.6 bits (50), Expect = 3e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 4 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 63
||||||||| ||||||||||||||||||||||||||| || | | |||||||||||||
Sbjct: 4 atggctgcactcaacattcattgctgtcggtgggtttgaatgtcaaccaactcactgatc 63
Query: 64 aatgaatgcaaactgcgg 81
||||||||||||||||||
Sbjct: 64 aatgaatgcaaactgcgg 81
>33247_bta-mir-181b-2:mirbase
Length = 89
Score = 99.6 bits (50), Expect = 3e-22
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 4 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 63
||||||||| ||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 4 atggctgcactcaacattcattgctgtcggtgggtttgactttgaatcaactcactgatc 63
Query: 64 aatgaatgcaaactgcggacca 85
|||||||| |||||||||||||
Sbjct: 64 aatgaatgtaaactgcggacca 85
>34009_ssc-mir-181b-2:mirbase
Length = 86
Score = 99.6 bits (50), Expect = 3e-22
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 4 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 63
||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 60
Query: 64 aatgaatgcaaactgcggacca 85
||||||||||||||||||||||
Sbjct: 61 aatgaatgcaaactgcggacca 82
>27770_mml-mir-181b-2:mirbase
Length = 89
Score = 91.7 bits (46), Expect = 7e-20
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 4 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 63
||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 4 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 63
Query: 64 aatgaatgcaaactgcggacca 85
|||||||||||||||||||||
Sbjct: 64 gatgaatgcaaactgcggacca 85
>30254_ptr-mir-181b-2:mirbase
Length = 88
Score = 91.7 bits (46), Expect = 7e-20
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 4 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 63
||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 3 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 62
Query: 64 aatgaatgcaaactgcggacca 85
|||||||||||||||||||||
Sbjct: 63 gatgaatgcaaactgcggacca 84
>30868_ppy-mir-181b-2:mirbase
Length = 89
Score = 91.7 bits (46), Expect = 7e-20
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 4 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 63
||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 4 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 63
Query: 64 aatgaatgcaaactgcggacca 85
|||||||||||||||||||||
Sbjct: 64 gatgaatgcaaactgcggacca 85
>32765_rno-mir-181b-2:mirbase
Length = 88
Score = 91.7 bits (46), Expect = 7e-20
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 4 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 63
||||||||| ||||||||||||||||||||||||||| || | | |||||||||| ||
Sbjct: 3 atggctgcactcaacattcattgctgtcggtgggtttgaatgtcaaccaactcactggtc 62
Query: 64 aatgaatgcaaactgcgg 81
||||||||||||||||||
Sbjct: 63 aatgaatgcaaactgcgg 80
>34331_dre-mir-181b-2:mirbase
Length = 86
Score = 83.8 bits (42), Expect = 2e-17
Identities = 74/82 (90%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 1 ctaatggctgcaatcaacattcattgctgtcggtgggttt-tcattgctatcaactcact 59
|||||| ||||||| ||||||||||||||||||||||||| | || | | |||||||||
Sbjct: 1 ctaatgactgcaataaacattcattgctgtcggtgggtttctaatagaca-caactcact 59
Query: 60 gatcaatgaatgcaaactgcgg 81
||||||||||||||||||||||
Sbjct: 60 gatcaatgaatgcaaactgcgg 81
>25806_xtr-mir-181b-2:mirbase
Length = 83
Score = 69.9 bits (35), Expect = 3e-13
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 3 aatggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgat 62
|||||||||||| |||||||||||||||||||||||| | || | | |||| ||||
Sbjct: 1 aatggctgcaataaacattcattgctgtcggtgggttgtagtttagaaaagctcattgat 60
Query: 63 caatgaatgcaaactgcggacca 85
||||||||||||||||| |||||
Sbjct: 61 caatgaatgcaaactgcagacca 83
>26734_cfa-mir-181b-2:mirbase
Length = 60
Score = 63.9 bits (32), Expect = 2e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 16 aacattcattgctgtcggtgggttttcattgctatcaactcactgatcaatgaatgcaaa 75
||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggtttgagtctgaatcaactcactgatcaatgaatgcaaa 60
>25976_gga-mir-181b-1:mirbase
Length = 89
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggttt 40
||||||||||||||||||||||||||||||
Sbjct: 10 caatcaacattcattgctgtcggtgggttt 39
>27404_mdo-mir-181b:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggttt 40
||||||||||||||||||||||||||||||
Sbjct: 8 caatcaacattcattgctgtcggtgggttt 37
>34612_fru-mir-181b-1:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggttt 40
||||||||||||||||||||||||||||||
Sbjct: 9 caatcaacattcattgctgtcggtgggttt 38
>34759_tni-mir-181b-1:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggttt 40
||||||||||||||||||||||||||||||
Sbjct: 9 caatcaacattcattgctgtcggtgggttt 38
>25805_xtr-mir-181b-1:mirbase
Length = 83
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||||||||||||||||
Sbjct: 8 caatcaacattcattgctgtcggtgggtt 36
>27579_lla-mir-181b:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>27769_mml-mir-181b-1:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>28223_mne-mir-181b:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>28315_ggo-mir-181b:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>28485_hsa-mir-181b-1:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>30104_ppa-mir-181b:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>30253_ptr-mir-181b-1:mirbase
Length = 108
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>30867_ppy-mir-181b:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>31894_mmu-mir-181b-1:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||||||||||||||||
Sbjct: 7 caatcaacattcattgctgtcggtgggtt 35
>32764_rno-mir-181b-1:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>33246_bta-mir-181b-1:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>34008_ssc-mir-181b-1:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||||||||||||||||
Sbjct: 6 caatcaacattcattgctgtcggtgggtt 34
>34330_dre-mir-181b-1:mirbase
Length = 109
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 12 aatcaacattcattgctgtcggtgggttt 40
|||||||||||||||||||||||||||||
Sbjct: 33 aatcaacattcattgctgtcggtgggttt 61
>34613_fru-mir-181b-2:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 10 gcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatcaatgaa 69
||||| ||||||||||||||||||||||||| || || || | |||||||| |||||||
Sbjct: 5 gcaataaacattcattgctgtcggtgggtttctatggcaat-agctcactgaccaatgaa 63
Query: 70 tgcaaactgcgg 81
|| | |||||||
Sbjct: 64 tgaagactgcgg 75
>34760_tni-mir-181b-2:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 10 gcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatcaatgaa 69
||||| ||||||||||||||||||||||||| ||| || || | ||| |||| |||||||
Sbjct: 5 gcaataaacattcattgctgtcggtgggtttccatggcaat-agctcgctgaccaatgaa 63
Query: 70 tgcaaactgcgg 81
|| | |||||||
Sbjct: 64 tgaagactgcgg 75
>26485_tgu-mir-181b-1:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggttt 40
|||| |||||||||||||||||||||||||
Sbjct: 6 caatgaacattcattgctgtcggtgggttt 35
>31511_oan-mir-181b:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggttt 40
|||| |||||||||||||||||||||||||
Sbjct: 22 caatgaacattcattgctgtcggtgggttt 51
>27772_mml-mir-181d:mirbase
Length = 137
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||| ||||||||||||
Sbjct: 31 caatcaacattcattgttgtcggtgggtt 59
>28488_hsa-mir-181d:mirbase
Length = 137
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||| ||||||||||||
Sbjct: 31 caatcaacattcattgttgtcggtgggtt 59
>30256_ptr-mir-181d:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||| ||||||||||||
Sbjct: 30 caatcaacattcattgttgtcggtgggtt 58
>30870_ppy-mir-181d:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||| ||||||||||||
Sbjct: 30 caatcaacattcattgttgtcggtgggtt 58
>31512_oan-mir-181c:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
||||||||||||||| |||||||||||||
Sbjct: 14 caatcaacattcattactgtcggtgggtt 42
>33249_bta-mir-181d:mirbase
Length = 113
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||| ||||||||||||
Sbjct: 30 caatcaacattcattgttgtcggtgggtt 58
>34011_ssc-mir-181d:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||| ||||||||||||
Sbjct: 4 caatcaacattcattgttgtcggtgggtt 32
>34012_ssc-mir-181d:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||||||||||||||| ||||||||||||
Sbjct: 4 caatcaacattcattgttgtcggtgggtt 32
>34332_dre-mir-181c:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 acattcattgctgtcggtgggtttt 41
|||||||||||||||||||||||||
Sbjct: 13 acattcattgctgtcggtgggtttt 37
>26733_cfa-mir-181b-1:mirbase
Length = 62
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 aacattcattgctgtcggtgggtt 39
||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggtt 24
>31897_mmu-mir-181d:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||| ||||||||||| ||||||||||||
Sbjct: 2 caattaacattcattgttgtcggtgggtt 30
>32767_rno-mir-181d:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 caatcaacattcattgctgtcggtgggtt 39
|||| ||||||||||| ||||||||||||
Sbjct: 6 caattaacattcattgttgtcggtgggtt 34
>26736_cfa-mir-181d:mirbase
Length = 64
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aacattcattgctgtcggtgggtt 39
||||||||||| ||||||||||||
Sbjct: 1 aacattcattgttgtcggtgggtt 24
