miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26487_tgu-mir-184:mirbase
Length = 112
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 12 cccttatcacttttccagcccagcttcttcgctctgactgttggacggagaactgataag 71
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 40 cccttatcacttttccagcccagcttctgcactctgactgttggacggagaactgataag 99
Query: 72 ggt 74
|||
Sbjct: 100 ggt 102
>27775_mml-mir-184:mirbase
Length = 84
Score = 71.9 bits (36), Expect = 6e-14
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 11 ccccttatcacttttccagcccagcttcttcgctctgactgttggacggagaactgataa 70
||||||||||||||||||||||||||| | || | | |||||||||||||||||||||
Sbjct: 11 ccccttatcacttttccagcccagctttatgactgtaagtgttggacggagaactgataa 70
Query: 71 gggt 74
||||
Sbjct: 71 gggt 74
>28225_mne-mir-184:mirbase
Length = 84
Score = 71.9 bits (36), Expect = 6e-14
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 11 ccccttatcacttttccagcccagcttcttcgctctgactgttggacggagaactgataa 70
||||||||||||||||||||||||||| | || | | |||||||||||||||||||||
Sbjct: 11 ccccttatcacttttccagcccagctttatgactgtaagtgttggacggagaactgataa 70
Query: 71 gggt 74
||||
Sbjct: 71 gggt 74
>28491_hsa-mir-184:mirbase
Length = 84
Score = 71.9 bits (36), Expect = 6e-14
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 11 ccccttatcacttttccagcccagcttcttcgctctgactgttggacggagaactgataa 70
||||||||||||||||||||||||||| | || | | |||||||||||||||||||||
Sbjct: 11 ccccttatcacttttccagcccagctttgtgactgtaagtgttggacggagaactgataa 70
Query: 71 gggt 74
||||
Sbjct: 71 gggt 74
>30259_ptr-mir-184:mirbase
Length = 84
Score = 71.9 bits (36), Expect = 6e-14
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 11 ccccttatcacttttccagcccagcttcttcgctctgactgttggacggagaactgataa 70
||||||||||||||||||||||||||| | || | | |||||||||||||||||||||
Sbjct: 11 ccccttatcacttttccagcccagctttgtgactgtaagtgttggacggagaactgataa 70
Query: 71 gggt 74
||||
Sbjct: 71 gggt 74
>30873_ppy-mir-184:mirbase
Length = 84
Score = 71.9 bits (36), Expect = 6e-14
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 11 ccccttatcacttttccagcccagcttcttcgctctgactgttggacggagaactgataa 70
||||||||||||||||||||||||||| | || | | |||||||||||||||||||||
Sbjct: 11 ccccttatcacttttccagcccagctttgtgactgtaagtgttggacggagaactgataa 70
Query: 71 gggt 74
||||
Sbjct: 71 gggt 74
>33252_bta-mir-184:mirbase
Length = 83
Score = 71.9 bits (36), Expect = 6e-14
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 11 ccccttatcacttttccagcccagcttcttcgctctgactgttggacggagaactgataa 70
||||||||||||||||||||| ||||| | |||| |||||||||||||||||||||||
Sbjct: 11 ccccttatcacttttccagcc-agctttgtgactctaactgttggacggagaactgataa 69
Query: 71 gggt 74
||||
Sbjct: 70 gggt 73
>26739_cfa-mir-184:mirbase
Length = 68
Score = 63.9 bits (32), Expect = 1e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 11 ccccttatcacttttccagcccagcttcttcgctctgactgttggacggagaactgataa 70
||||||||||||||||||||| ||||| | |||| | |||||||||||||||||||||
Sbjct: 1 ccccttatcacttttccagcc-agctttgtgactctaagtgttggacggagaactgataa 59
Query: 71 gggt 74
||||
Sbjct: 60 gggt 63
>27408_mdo-mir-184:mirbase
Length = 84
Score = 63.9 bits (32), Expect = 1e-11
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 11 ccccttatcacttttccagcccagcttcttcgctctgactgttggacggagaactgataa 70
||||||||||||||||||||||||||| | || | |||||||||||||||||||||
Sbjct: 11 ccccttatcacttttccagcccagctttctaatgctaattgttggacggagaactgataa 70
Query: 71 gggt 74
||||
Sbjct: 71 gggt 74
>34014_ssc-mir-184:mirbase
Length = 83
Score = 63.9 bits (32), Expect = 1e-11
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 11 ccccttatcacttttccagcccagcttcttcgctctgactgttggacggagaactgataa 70
||||||||||||||||||||| ||||| | |||| | |||||||||||||||||||||
Sbjct: 11 ccccttatcacttttccagcc-agctttgtgactctaaatgttggacggagaactgataa 69
Query: 71 gggt 74
||||
Sbjct: 70 gggt 73
>27065_eca-mir-184:mirbase
Length = 70
Score = 60.0 bits (30), Expect = 2e-10
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 13 ccttatcacttttccagcccagcttcttcgctctgactgttggacggagaactgataagg 72
||||||||||||||||||| ||||| | |||| | |||||||||||||||||||||||
Sbjct: 7 ccttatcacttttccagcc-agctttgtgactctaagtgttggacggagaactgataagg 65
Query: 73 gt 74
||
Sbjct: 66 gt 67
>31900_mmu-mir-184:mirbase
Length = 69
Score = 60.0 bits (30), Expect = 2e-10
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 13 ccttatcacttttccagcccagcttcttcgctctgactgttggacggagaactgataagg 72
||||||||||||||||||| ||||| | |||| | |||||||||||||||||||||||
Sbjct: 6 ccttatcacttttccagcc-agctttgtgactctaagtgttggacggagaactgataagg 64
Query: 73 gt 74
||
Sbjct: 65 gt 66
>25809_xtr-mir-184:mirbase
Length = 83
Score = 56.0 bits (28), Expect = 3e-09
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 13 ccttatcacttttccagcccagcttcttcgctctgactgttggacggagaactgataagg 72
||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 13 ccttatcacttttccagcccagcttttcatgacaaactgttggacggagaactgataagg 72
>31515_oan-mir-184:mirbase
Length = 128
Score = 56.0 bits (28), Expect = 3e-09
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 15 ttatcacttttccagcccagcttcttcgctctgactgttggacggagaactgataagggt 74
||||||||||||||||||||||| | | ||| | ||||||||||||| ||||||||||
Sbjct: 41 ttatcacttttccagcccagctttctggttctagccgttggacggagaattgataagggt 100
>32770_rno-mir-184:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 50 tgttggacggagaactgataagggt 74
|||||||||||||||||||||||||
Sbjct: 44 tgttggacggagaactgataagggt 68
>34335_dre-mir-184:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 ccttatcacttttccagcccagct 36
||||||||||||||||||||||||
Sbjct: 14 ccttatcacttttccagcccagct 37
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 53 gttggacggagaactgataaggg 75
>34336_dre-mir-184-2:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 ccttatcacttttccagcccagct 36
||||||||||||||||||||||||
Sbjct: 8 ccttatcacttttccagcccagct 31
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 47 gttggacggagaactgataaggg 69
>34616_fru-mir-184:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 ccttatcacttttccagcccagct 36
||||||||||||||||||||||||
Sbjct: 12 ccttatcacttttccagcccagct 35
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 51 gttggacggagaactgataaggg 73
>34763_tni-mir-184:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 13 ccttatcacttttccagcccagct 36
||||||||||||||||||||||||
Sbjct: 12 ccttatcacttttccagcccagct 35
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gttggacggagaactgataaggg 73
|||||||||||||||||||||||
Sbjct: 51 gttggacggagaactgataaggg 73
>38873_lgi-mir-184:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>38757_cte-mir-184a:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>24688_bfl-mir-184:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>24844_cin-mir-184:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 66 tggacggagaactgataaggg 86
>34829_spu-mir-184:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>34885_sko-mir-184:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>34975_isc-mir-184:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>35065_api-mir-184a:mirbase
Length = 65
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 38 tggacggagaactgataaggg 58
>35196_aae-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>35293_aga-mir-184:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 51 tggacggagaactgataaggg 71
>35371_ame-mir-184:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 56 tggacggagaactgataaggg 76
>35541_bmo-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 52 tggacggagaactgataaggg 72
>36025_cqu-mir-184:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 52 tggacggagaactgataaggg 72
>36110_dan-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>36188_der-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>36277_dgr-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>36393_dme-mir-184:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>36394_dme-mir-184:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>36786_dmo-mir-184:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 59 tggacggagaactgataaggg 79
>36862_dpe-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>36937_dps-mir-184:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 61 tggacggagaactgataaggg 81
>37148_dse-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>37224_dsi-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>37362_dvi-mir-184:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 59 tggacggagaactgataaggg 79
>37441_dwi-mir-184:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 55 tggacggagaactgataaggg 75
>37516_dya-mir-184:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 54 tggacggagaactgataaggg 74
>37581_ngi-mir-184:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 54 tggacggagaactgataaggg 74
>37613_nlo-mir-184:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 54 tggacggagaactgataaggg 74
>37653_nvi-mir-184:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 56 tggacggagaactgataaggg 76
>37747_tca-mir-184:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 49 tggacggagaactgataaggg 69
>37748_tca-mir-184:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 tggacggagaactgataaggg 73
|||||||||||||||||||||
Sbjct: 49 tggacggagaactgataaggg 69
