miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26494_tgu-mir-199-1:mirbase
Length = 71
Score = 141 bits (71), Expect = 1e-34
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 14 gcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 60
Query: 74 taggctgtgct 84
|||||||||||
Sbjct: 61 taggctgtgct 71
>26495_tgu-mir-199-1:mirbase
Length = 71
Score = 141 bits (71), Expect = 1e-34
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 14 gcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 60
Query: 74 taggctgtgct 84
|||||||||||
Sbjct: 61 taggctgtgct 71
>31922_mmu-mir-199b:mirbase
Length = 110
Score = 125 bits (63), Expect = 6e-30
Identities = 81/87 (93%)
Strand = Plus / Plus
Query: 1 ctccactccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtag 60
||||||||||||| ||||||||| ||||||||||||||||||| | | ||||||||||||
Sbjct: 12 ctccactccgtctacccagtgtttagactacctgttcaggactcccaaattgtacagtag 71
Query: 61 tctgcacattggttaggctgtgctggg 87
|||||||||||||||||||| ||||||
Sbjct: 72 tctgcacattggttaggctgggctggg 98
>27417_mdo-mir-199b:mirbase
Length = 89
Score = 117 bits (59), Expect = 1e-27
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 1 ctccactccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtag 60
||||||||||||| ||||||||| |||||| |||||||||||| | | ||||||||||||
Sbjct: 1 ctccactccgtctacccagtgtttagactatctgttcaggactccaatattgtacagtag 60
Query: 61 tctgcacattggttaggctgtgctggg 87
|||||||||||||||||||| ||||||
Sbjct: 61 tctgcacattggttaggctgggctggg 87
>28516_hsa-mir-199b:mirbase
Length = 110
Score = 117 bits (59), Expect = 1e-27
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 1 ctccactccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtag 60
||||||||||||| ||||||||| |||||| |||||||||||| | | ||||||||||||
Sbjct: 12 ctccactccgtctacccagtgtttagactatctgttcaggactcccaaattgtacagtag 71
Query: 61 tctgcacattggttaggctgtgctggg 87
|||||||||||||||||||| ||||||
Sbjct: 72 tctgcacattggttaggctgggctggg 98
>28517_hsa-mir-199b:mirbase
Length = 110
Score = 117 bits (59), Expect = 1e-27
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 1 ctccactccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtag 60
||||||||||||| ||||||||| |||||| |||||||||||| | | ||||||||||||
Sbjct: 12 ctccactccgtctacccagtgtttagactatctgttcaggactcccaaattgtacagtag 71
Query: 61 tctgcacattggttaggctgtgctggg 87
|||||||||||||||||||| ||||||
Sbjct: 72 tctgcacattggttaggctgggctggg 98
>30278_ptr-mir-199b:mirbase
Length = 109
Score = 117 bits (59), Expect = 1e-27
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 1 ctccactccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtag 60
||||||||||||| ||||||||| |||||| |||||||||||| | | ||||||||||||
Sbjct: 12 ctccactccgtctacccagtgtttagactatctgttcaggactcccaaattgtacagtag 71
Query: 61 tctgcacattggttaggctgtgctggg 87
|||||||||||||||||||| ||||||
Sbjct: 72 tctgcacattggttaggctgggctggg 98
>33276_bta-mir-199b:mirbase
Length = 100
Score = 117 bits (59), Expect = 1e-27
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 1 ctccactccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtag 60
||||||||||||| ||||||||| |||||| |||||||||||| | | ||||||||||||
Sbjct: 2 ctccactccgtctacccagtgtttagactatctgttcaggactcccaaattgtacagtag 61
Query: 61 tctgcacattggttaggctgtgctggg 87
|||||||||||||||||||| ||||||
Sbjct: 62 tctgcacattggttaggctgggctggg 88
>33794_bta-mir-3604-2:mirbase
Length = 73
Score = 97.6 bits (49), Expect = 1e-21
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 8 ccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcac 67
|||||| ||||||||| |||||| |||||||||||| | | |||||||||||||||||||
Sbjct: 73 ccgtctacccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcac 14
Query: 68 attggttaggctg 80
|||||||||||||
Sbjct: 13 attggttaggctg 1
>34032_ssc-mir-199b:mirbase
Length = 74
Score = 97.6 bits (49), Expect = 1e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 8 ccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcac 67
|||||| ||||||||| |||||| |||||||||||| | | |||||||||||||||||||
Sbjct: 1 ccgtctacccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcac 60
Query: 68 attggttaggctg 80
|||||||||||||
Sbjct: 61 attggttaggctg 73
>34353_dre-mir-199-2:mirbase
Length = 96
Score = 97.6 bits (49), Expect = 1e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 12 ctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattg 71
|||||||||||||||||||||||||||||| | | | ||||||||||||||||||||||
Sbjct: 27 ctgcccagtgttcagactacctgttcaggaattagtgtttgtacagtagtctgcacattg 86
Query: 72 gttaggctg 80
|||||||||
Sbjct: 87 gttaggctg 95
>27085_eca-mir-199b:mirbase
Length = 69
Score = 89.7 bits (45), Expect = 3e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 10 gtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacat 69
|||| ||||||||| |||||| |||||||||||| | | |||||||||||||||||||||
Sbjct: 1 gtctacccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcacat 60
Query: 70 tggttaggc 78
|||||||||
Sbjct: 61 tggttaggc 69
>27086_eca-mir-199b:mirbase
Length = 69
Score = 89.7 bits (45), Expect = 3e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 10 gtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacat 69
|||| ||||||||| |||||| |||||||||||| | | |||||||||||||||||||||
Sbjct: 1 gtctacccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcacat 60
Query: 70 tggttaggc 78
|||||||||
Sbjct: 61 tggttaggc 69
>34626_fru-mir-199-2:mirbase
Length = 73
Score = 89.7 bits (45), Expect = 3e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 12 ctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattg 71
|||||||||||||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct: 5 ctgcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattg 64
Query: 72 gttaggctg 80
|||||||||
Sbjct: 65 gttaggctg 73
>34773_tni-mir-199-2:mirbase
Length = 73
Score = 89.7 bits (45), Expect = 3e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 12 ctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattg 71
|||||||||||||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct: 5 ctgcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattg 64
Query: 72 gttaggctg 80
|||||||||
Sbjct: 65 gttaggctg 73
>25818_xtr-mir-199a:mirbase
Length = 96
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 10 ctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgc 69
Query: 66 acattggttag 76
|||||||||||
Sbjct: 70 acattggttag 80
>25989_gga-mir-199-2:mirbase
Length = 108
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 20 ctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgc 79
Query: 66 acattggttag 76
|||||||||||
Sbjct: 80 acattggttag 90
>26496_tgu-mir-199-2:mirbase
Length = 128
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 17 ctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgc 76
Query: 66 acattggttag 76
|||||||||||
Sbjct: 77 acattggttag 87
>26497_tgu-mir-199-2:mirbase
Length = 128
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 17 ctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgc 76
Query: 66 acattggttag 76
|||||||||||
Sbjct: 77 acattggttag 87
>27582_lla-mir-199a:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>27623_sla-mir-199a:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>27795_mml-mir-199a-1:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>28231_mne-mir-199a:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>28326_ggo-mir-199a:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>28514_hsa-mir-199a-2:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>28515_hsa-mir-199a-2:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>30115_ppa-mir-199a:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>30277_ptr-mir-199a-2:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>30892_ppy-mir-199a:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>30893_ppy-mir-199a-2:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>30894_ppy-mir-199a-2:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>31527_oan-mir-199:mirbase
Length = 118
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>31920_mmu-mir-199a-2:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>31921_mmu-mir-199a-2:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>32786_rno-mir-199a:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>32787_rno-mir-199a:mirbase
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>33272_bta-mir-199a-1:mirbase
Length = 104
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>33273_bta-mir-199a-1:mirbase
Length = 104
Score = 85.7 bits (43), Expect = 5e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 22 ctccgtcgccccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgc 81
Query: 66 acattggttag 76
|||||||||||
Sbjct: 82 acattggttag 92
>34029_ssc-mir-199a-1:mirbase
Length = 76
Score = 83.8 bits (42), Expect = 2e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 15 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 74
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 9 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 68
Query: 75 ag 76
||
Sbjct: 69 ag 70
>30895_ppy-mir-199b:mirbase
Length = 111
Score = 81.8 bits (41), Expect = 8e-17
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 19 gtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggttaggc 78
||||| |||||| |||||||||||| | | ||||||||||| ||||||||||||||||||
Sbjct: 31 gtgtttagactatctgttcaggactcccaaattgtacagtattctgcacattggttaggc 90
Query: 79 tgtgctggg 87
|| ||||||
Sbjct: 91 tgggctggg 99
>30896_ppy-mir-199b:mirbase
Length = 111
Score = 81.8 bits (41), Expect = 8e-17
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 19 gtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggttaggc 78
||||| |||||| |||||||||||| | | ||||||||||| ||||||||||||||||||
Sbjct: 31 gtgtttagactatctgttcaggactcccaaattgtacagtattctgcacattggttaggc 90
Query: 79 tgtgctggg 87
|| ||||||
Sbjct: 91 tgggctggg 99
>26757_cfa-mir-199-2:mirbase
Length = 59
Score = 77.8 bits (39), Expect = 1e-15
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 16 ccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 74
||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 59
>26758_cfa-mir-199-3:mirbase
Length = 59
Score = 77.8 bits (39), Expect = 1e-15
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 16 ccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 74
|||||||| |||||| |||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 1 ccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcacattggtt 59
>27083_eca-mir-199a:mirbase
Length = 61
Score = 77.8 bits (39), Expect = 1e-15
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 15 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 73
|||||||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggt 59
>27084_eca-mir-199a:mirbase
Length = 61
Score = 77.8 bits (39), Expect = 1e-15
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 15 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 73
|||||||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggt 59
>25517_pma-mir-199a:mirbase
Length = 79
Score = 75.8 bits (38), Expect = 5e-15
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 7 tccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgca 66
||||||| ||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 3 tccgtctccccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgca 62
Query: 67 cattggttag 76
||||||||||
Sbjct: 63 cattggttag 72
>31918_mmu-mir-199a-1:mirbase
Length = 70
Score = 69.9 bits (35), Expect = 3e-13
Identities = 60/66 (90%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 15 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 72
||||||||||||||||||||||||||| || || || |||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctgggacat-gtacagtagtctgcacattgg 64
Query: 73 ttaggc 78
||||||
Sbjct: 65 ttaggc 70
>31919_mmu-mir-199a-1:mirbase
Length = 70
Score = 69.9 bits (35), Expect = 3e-13
Identities = 60/66 (90%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 15 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 72
||||||||||||||||||||||||||| || || || |||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctgggacat-gtacagtagtctgcacattgg 64
Query: 73 ttaggc 78
||||||
Sbjct: 65 ttaggc 70
>34352_dre-mir-199-1:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 6 ctccgtcatcccagtgttcagactacctgttcaggatcatactggtgtacagtagtctgc 65
Query: 66 acattggttaggctgtgc 83
||||||||||| ||||||
Sbjct: 66 acattggttagactgtgc 83
>33793_bta-mir-3604-1:mirbase
Length = 78
Score = 65.9 bits (33), Expect = 5e-12
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 15 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 72
|||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 70 cccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcacattgg 11
Query: 73 ttaggctg 80
||||||||
Sbjct: 10 ttaggctg 3
>34030_ssc-mir-199a-2:mirbase
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 15 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 72
|||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 10 cccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcacattgg 69
Query: 73 ttaggctg 80
||||||||
Sbjct: 70 ttaggctg 77
>34031_ssc-mir-199a-2:mirbase
Length = 80
Score = 65.9 bits (33), Expect = 5e-12
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 15 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 72
|||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 10 cccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcacattgg 69
Query: 73 ttaggctg 80
||||||||
Sbjct: 70 ttaggctg 77
>27796_mml-mir-199a-2:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 7e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 15 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 72
||||||||||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattgg 65
Query: 73 ttaggc 78
||||||
Sbjct: 66 ttaggc 71
>27797_mml-mir-199a-2:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 7e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 15 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 72
||||||||||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattgg 65
Query: 73 ttaggc 78
||||||
Sbjct: 66 ttaggc 71
>28512_hsa-mir-199a-1:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 7e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 15 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 72
||||||||||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatgtgtacagtagtctgcacattgg 65
Query: 73 ttaggc 78
||||||
Sbjct: 66 ttaggc 71
>28513_hsa-mir-199a-1:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 7e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 15 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 72
||||||||||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatgtgtacagtagtctgcacattgg 65
Query: 73 ttaggc 78
||||||
Sbjct: 66 ttaggc 71
>33274_bta-mir-199a-2:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 7e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 15 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 72
|||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcacattgg 65
Query: 73 ttaggc 78
||||||
Sbjct: 66 ttaggc 71
>33275_bta-mir-199a-2:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 7e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 15 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 72
|||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcacattgg 65
Query: 73 ttaggc 78
||||||
Sbjct: 66 ttaggc 71
>34625_fru-mir-199-1:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 7e-11
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgc 65
||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 6 ctccgtcatcccagtgttcagactacctgttcaggattttactggtgtacagtagtctgc 65
Query: 66 acattggttag 76
|||||||||||
Sbjct: 66 acattggttag 76
>30276_ptr-mir-199a-1:mirbase
Length = 70
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/65 (87%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 15 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 72
||||||||||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatgtgtacagtagtctgcacattgg 65
Query: 73 ttagg 77
|||||
Sbjct: 66 ttagg 70
>34354_dre-mir-199-3:mirbase
Length = 98
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 54 acagtagtctgcacattggttaggctgtgctgggatacac 93
||||||||| ||||||||||||||||| ||||||| ||||
Sbjct: 55 acagtagtccgcacattggttaggctgggctgggacacac 94
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 12 ctgcccagtgttcagactacctgttca 38
|||||||||||||||||||||||||||
Sbjct: 13 ctgcccagtgttcagactacctgttca 39
>25518_pma-mir-199b:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 61/70 (87%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 9 cgtctgcccagtgttcagactacctgttca--ggactacgagattgtacagtagtctgca 66
|||||||||||||||| ||||||||||||| ||| | | | ||||||||||||||||
Sbjct: 5 cgtctgcccagtgttctgactacctgttcacgtgac-aagcaaatgtacagtagtctgca 63
Query: 67 cattggttag 76
||||||||||
Sbjct: 64 cattggttag 73
>34627_fru-mir-199-3:mirbase
Length = 99
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 12 ctgcccagtgttcagactacctgttca 38
|||||||||||||||||||||||||||
Sbjct: 14 ctgcccagtgttcagactacctgttca 40
>34774_tni-mir-199-3:mirbase
Length = 95
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 12 ctgcccagtgttcagactacctgttca 38
|||||||||||||||||||||||||||
Sbjct: 12 ctgcccagtgttcagactacctgttca 38
>26756_cfa-mir-199-1:mirbase
Length = 61
Score = 52.0 bits (26), Expect = 7e-08
Identities = 53/61 (86%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 16 ccagtgttcagactacctgttca--ggactacgagattgtacagtagtctgcacattggt 73
||||||||||||||||||||||| || || || |||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcacattggt 60
Query: 74 t 74
|
Sbjct: 61 t 61
>34772_tni-mir-199-1:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 51 tgtacagtagtctgcacattggttag 76
||||||||||||||||||||||||||
Sbjct: 50 tgtacagtagtctgcacattggttag 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 6 ctccgtctgcccagtgttcagactacctgttca 38
||||||| ||||||||||||||||||||||||
Sbjct: 5 ctccgtccacccagtgttcagactacctgttca 37
>33277_bta-mir-199c:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 tgtacagtagtctgcacattgg 72
||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattgg 65
