miRNEST 2.0, an integrative microRNA resource :: BLAST
>40043_ath-MIR168a:mirbase
Length = 138
Score = 89.7 bits (45), Expect = 6e-19
Identities = 102/118 (86%), Gaps = 6/118 (5%)
Strand = Plus / Plus
Query: 22 gctcggattcgcctggtgcaggtcgggaaccaatt-gtctgacacatccacga-agtttt 79
|||||||||||| |||||||||||||||||||||| | |||||||| || || | ||||
Sbjct: 10 gctcggattcgcttggtgcaggtcgggaaccaattcggctgacacagcctcgtgactttt 69
Query: 80 ac----ttgctggtttgtgagcagggattggatcccgccttgcatcaaatgaatcgga 133
| || |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 70 aaacctttattggtttgtgagcagggattggatcccgccttgcatcaactgaatcgga 127
>39832_aly-MIR168a:mirbase
Length = 155
Score = 87.7 bits (44), Expect = 2e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 86 tggtttgtgagcagggattggatcccgccttgcatcaaatgaatcgga 133
|||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 86 tggtttgtgagcagggattggatcccgccttgcatcaactgaatcgga 133
>40271_bna-MIR168:mirbase
Length = 133
Score = 65.9 bits (33), Expect = 8e-12
Identities = 91/109 (83%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 30 tcgcctggtgcaggtcgggaaccaattgtctgacacatccacgaagttttacttgct-gg 88
|||| ||||||||||||||||| |||| ||||||| ||||| | ||| | || | ||
Sbjct: 18 tcgcttggtgcaggtcgggaactgattggctgacaccgccacgtggctttccatggttgg 77
Query: 89 tttgtgagcagggattggatcccgccttgcatcaaatgaatcggagtcc 137
|||||||||||||| ||||||||||||| ||||| |||||| ||||||
Sbjct: 78 cttgtgagcagggatcggatcccgccttgtatcaagtgaatccgagtcc 126
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 102 attggatcccgccttgcatcaaatgaatcggag 134
|||||||||||||||||||||| ||||||||||
Sbjct: 103 attggatcccgccttgcatcaactgaatcggag 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 28 attcgcctggtgcaggtcgggaac 51
|||||| |||||||||||||||||
Sbjct: 9 attcgcttggtgcaggtcgggaac 32
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 102 attggatcccgccttgcatcaaatgaatcggag 134
|||||||||||||||||||||| ||||||||||
Sbjct: 127 attggatcccgccttgcatcaactgaatcggag 159
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 27 gattcgcctggtgcaggtcgggaac 51
||||||| |||||||||||||||||
Sbjct: 8 gattcgcttggtgcaggtcgggaac 32
>41215_crt-MIR168:mirbase
Length = 201
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 102 attggatcccgccttgcatcaaatgaatcggag 134
|||||||||||||||||||||| ||||||||||
Sbjct: 136 attggatcccgccttgcatcaactgaatcggag 168
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 28 attcgcctggtgcaggtcgggaac 51
|||||| |||||||||||||||||
Sbjct: 19 attcgcttggtgcaggtcgggaac 42
>41210_ccl-MIR168:mirbase
Length = 176
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 102 attggatcccgccttgcatcaaatgaatcggag 134
|||||||||||||||||||||| ||||||||||
Sbjct: 135 attggatcccgccttgcatcaactgaatcggag 167
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 28 attcgcctggtgcaggtcgggaac 51
|||||| |||||||||||||||||
Sbjct: 18 attcgcttggtgcaggtcgggaac 41
>41101_tcc-MIR168:mirbase
Length = 167
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 102 attggatcccgccttgcatcaaatgaatcggag 134
|||||||||||||||||||||| ||||||||||
Sbjct: 120 attggatcccgccttgcatcaactgaatcggag 152
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 28 attcgcctggtgcaggtcgggaac 51
|||||| |||||||||||||||||
Sbjct: 19 attcgcttggtgcaggtcgggaac 42
>40448_gma-MIR168:mirbase
Length = 125
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 102 attggatcccgccttgcatcaaatgaatcggag 134
|||||||||||||||||||||| ||||||||||
Sbjct: 81 attggatcccgccttgcatcaactgaatcggag 113
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 28 attcgcctggtgcaggtcgggaacc 52
|||||| ||||||||||||||||||
Sbjct: 17 attcgcttggtgcaggtcgggaacc 41
>40044_ath-MIR168b:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 23 ctcggattcgcctggtgcaggtcgggaaccaattgtctgacac 65
||||||||||| ||||||||||||||||| |||| |||||||
Sbjct: 12 ctcggattcgcttggtgcaggtcgggaactgattggctgacac 54
>42742_zma-MIR168b:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 105 ggatcccgccttgcatcaaatgaatcggag 134
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>40355_rco-MIR168:mirbase
Length = 131
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 102 attggatcccgccttgcatcaaatgaatcg 131
|||||||||||||||||||||| |||||||
Sbjct: 99 attggatcccgccttgcatcaactgaatcg 128
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 28 attcgcctggtgcaggtcgggaac 51
|||||| |||||||||||||||||
Sbjct: 4 attcgcttggtgcaggtcgggaac 27
>41596_vvi-MIR168:mirbase
Length = 132
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 106 gatcccgccttgcatcaaatgaatcggag 134
|||||||||||||||||| ||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggag 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 28 attcgcctggtgcaggtcgggaacc 52
|||||| ||||||||||||||||||
Sbjct: 9 attcgcttggtgcaggtcgggaacc 33
>39833_aly-MIR168b:mirbase
Length = 176
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 23 ctcggattcgcctggtgcaggtcgggaac 51
||||||||||| |||||||||||||||||
Sbjct: 36 ctcggattcgcttggtgcaggtcgggaac 64
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 106 gatcccgccttgcatcaaatgaatcggagtcc 137
||||||| |||| ||||| |||||||||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggagtcc 141
>42741_zma-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 105 ggatcccgccttgcatcaaatgaatcggag 134
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 105 ggatcccgccttgcatcaaatgaatcggag 134
||||||||||||||| ||| ||||||||||
Sbjct: 60 ggatcccgccttgcaccaagtgaatcggag 89
>42460_sof-MIR168b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 105 ggatcccgccttgcatcaaatgaatcggag 134
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>42459_sof-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 105 ggatcccgccttgcatcaaatgaatcggag 134
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>41962_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 105 ggatcccgccttgcatcaaatgaatcggag 134
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41961_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 105 ggatcccgccttgcatcaaatgaatcggag 134
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41888_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 105 ggatcccgccttgcatcaaatgaatcggag 134
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41887_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 105 ggatcccgccttgcatcaaatgaatcggag 134
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41753_bdi-MIR168:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 105 ggatcccgccttgcatcaaatgaatcggag 134
||||||||||||||| ||| ||||||||||
Sbjct: 75 ggatcccgccttgcaccaagtgaatcggag 104
