miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>26316_gga-mir-1788:mirbase
          Length = 88

 Score =  174 bits (88), Expect = 7e-45
 Identities = 88/88 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccaccctgctgtgtcccgggcttgttttccgttgcctgcggtgtgttgcagtgactcagg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ccaccctgctgtgtcccgggcttgttttccgttgcctgcggtgtgttgcagtgactcagg 60

                                      
Query: 61 cagcgaaagcaagtctgggaggctgtgg 88
          ||||||||||||||||||||||||||||
Sbjct: 61 cagcgaaagcaagtctgggaggctgtgg 88




>34508_dre-mir-1788:mirbase
          Length = 101

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 52 tgactcaggcagcgaaagcaagtctgggaggc 83
          ||||||||||||| ||||||||||||||||||
Sbjct: 54 tgactcaggcagctaaagcaagtctgggaggc 85