miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>25879_gga-mir-1a-1:mirbase
          Length = 71

 Score =  123 bits (62), Expect = 2e-29
 Identities = 65/66 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  gacatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgt 60
          |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 6  gacatacttctttatatgcccatatgaacctggcaatctatggaatgtaaagaagtatgt 65

                
Query: 61 atttca 66
          ||||||
Sbjct: 66 atttca 71




>31763_mmu-mir-1a-1:mirbase
          Length = 77

 Score =  117 bits (59), Expect = 1e-27
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 10 acatacttctttatatgcccatatgaacctgctaagctatggaatgtaaagaagtatgta 69

                 
Query: 62 tttcagg 68
          |||||||
Sbjct: 70 tttcagg 76




>26937_eca-mir-1-2:mirbase
          Length = 76

 Score =  109 bits (55), Expect = 3e-25
 Identities = 64/67 (95%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          ||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||
Sbjct: 10 acatacttctttatatgcccatatggacctgctaagctatggaatgtaaagaagtatgta 69

                 
Query: 62 tttcagg 68
          |||||||
Sbjct: 70 tttcagg 76




>33905_ssc-mir-1:mirbase
          Length = 108

 Score =  103 bits (52), Expect = 2e-23
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  gacatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgt 60
          ||||||||||||||| |||||||||| |||||  ||||||||||||||||||||||||||
Sbjct: 24 gacatacttctttatgtgcccatatggacctgctaagctatggaatgtaaagaagtatgt 83

                  
Query: 61 atttcagg 68
          ||||||||
Sbjct: 84 atttcagg 91




>27640_mml-mir-1-1:mirbase
          Length = 77

 Score =  101 bits (51), Expect = 6e-23
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          ||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||
Sbjct: 10 acatacttctttatatgcccatatggacctgctaagctatggaatgtaaagaagtatgta 69

                 
Query: 62 tttcagg 68
          | |||||
Sbjct: 70 tctcagg 76




>33119_bta-mir-1-1:mirbase
          Length = 76

 Score =  101 bits (51), Expect = 6e-23
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| |||||||||| |||||  |||||||||||||||||||||||||||
Sbjct: 10 acatacttctttatgtgcccatatggacctgctaagctatggaatgtaaagaagtatgta 69

                 
Query: 62 tttcagg 68
          |||||||
Sbjct: 70 tttcagg 76




>28350_hsa-mir-1-1:mirbase
          Length = 71

 Score = 97.6 bits (49), Expect = 1e-21
 Identities = 58/61 (95%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          ||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||
Sbjct: 7  acatacttctttatatgcccatatggacctgctaagctatggaatgtaaagaagtatgta 66

           
Query: 62 t 62
          |
Sbjct: 67 t 67




>30137_ptr-mir-1-1:mirbase
          Length = 70

 Score = 97.6 bits (49), Expect = 1e-21
 Identities = 58/61 (95%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          ||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||
Sbjct: 6  acatacttctttatatgcccatatggacctgctaagctatggaatgtaaagaagtatgta 65

           
Query: 62 t 62
          |
Sbjct: 66 t 66




>30742_ppy-mir-1-1:mirbase
          Length = 71

 Score = 97.6 bits (49), Expect = 1e-21
 Identities = 58/61 (95%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          ||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||
Sbjct: 7  acatacttctttatatgcccatatggacctgctaagctatggaatgtaaagaagtatgta 66

           
Query: 62 t 62
          |
Sbjct: 67 t 67




>26613_cfa-mir-1-1:mirbase
          Length = 59

 Score = 93.7 bits (47), Expect = 2e-20
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                     
Query: 3  catacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||
Sbjct: 1  catacttctttatatgcccatatggacctgctaagctatggaatgtaaagaagtatgta 59




>34184_dre-mir-1-1:mirbase
          Length = 106

 Score = 83.8 bits (42), Expect = 1e-17
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                      
Query: 1  gacatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgt 60
          |||||||||||||||||||||||||||||  |   |||||||||||||||||||||||||
Sbjct: 22 gacatacttctttatatgcccatatgaacaagagcagctatggaatgtaaagaagtatgt 81

            
Query: 61 at 62
          ||
Sbjct: 82 at 83




>31416_oan-mir-1a:mirbase
          Length = 102

 Score = 77.8 bits (39), Expect = 9e-16
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| | ||||||||||| |   |||||||||||||||||||||||||||
Sbjct: 23 acatacttctttatgtacccatatgaacataaaaagctatggaatgtaaagaagtatgta 82

             
Query: 62 ttt 64
          |||
Sbjct: 83 ttt 85




>25684_xtr-mir-1a-1:mirbase
          Length = 84

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| | ||||||||||| |   | |||||||||||||||||||||||||
Sbjct: 14 acatacttctttatgtacccatatgaacatacaatgctatggaatgtaaagaagtatgta 73

             
Query: 62 ttt 64
          |||
Sbjct: 74 ttt 76




>25685_xtr-mir-1a-2:mirbase
          Length = 71

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 57/63 (90%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  gacatacttctttatatgcccatatgaacctggcaa-gctatggaatgtaaagaagtatg 59
          |||||||||||||||||| ||||||| |  || ||| |||||||||||||||||||||||
Sbjct: 6  gacatacttctttatatgtccatatggaagtgccaatgctatggaatgtaaagaagtatg 65

             
Query: 60 tat 62
          |||
Sbjct: 66 tat 68




>25880_gga-mir-1a-2:mirbase
          Length = 85

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| | ||||||||||| |   | |||||||||||||||||||||||||
Sbjct: 14 acatacttctttatgtacccatatgaacatacaatgctatggaatgtaaagaagtatgta 73

             
Query: 62 ttt 64
          |||
Sbjct: 74 ttt 76




>26389_tgu-mir-1-2:mirbase
          Length = 72

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| | ||||||||||| |   | |||||||||||||||||||||||||
Sbjct: 2  acatacttctttatgtacccatatgaacatacaatgctatggaatgtaaagaagtatgta 61

             
Query: 62 ttt 64
          |||
Sbjct: 62 ttt 64




>26936_eca-mir-1:mirbase
          Length = 78

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| | ||||||||||| |   | |||||||||||||||||||||||||
Sbjct: 11 acatacttctttatgtacccatatgaacatacaatgctatggaatgtaaagaagtatgta 70

             
Query: 62 ttt 64
          |||
Sbjct: 71 ttt 73




>27327_mdo-mir-1:mirbase
          Length = 86

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| | ||||||||||| |   | |||||||||||||||||||||||||
Sbjct: 14 acatacttctttatgtacccatatgaacatacaatgctatggaatgtaaagaagtatgta 73

             
Query: 62 ttt 64
          |||
Sbjct: 74 ttt 76




>27641_mml-mir-1-2:mirbase
          Length = 72

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| | ||||||||||| |   | |||||||||||||||||||||||||
Sbjct: 7  acatacttctttatgtacccatatgaacatacaaggctatggaatgtaaagaagtatgta 66

             
Query: 62 ttt 64
          |||
Sbjct: 67 ttt 69




>28351_hsa-mir-1-2:mirbase
          Length = 85

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| | ||||||||||| |   | |||||||||||||||||||||||||
Sbjct: 14 acatacttctttatgtacccatatgaacatacaatgctatggaatgtaaagaagtatgta 73

             
Query: 62 ttt 64
          |||
Sbjct: 74 ttt 76




>30036_ppa-mir-1:mirbase
          Length = 85

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| | ||||||||||| |   | |||||||||||||||||||||||||
Sbjct: 14 acatacttctttatgtacccatatgaacatacaatgctatggaatgtaaagaagtatgta 73

             
Query: 62 ttt 64
          |||
Sbjct: 74 ttt 76




>30138_ptr-mir-1-2:mirbase
          Length = 84

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| | ||||||||||| |   | |||||||||||||||||||||||||
Sbjct: 14 acatacttctttatgtacccatatgaacatacaatgctatggaatgtaaagaagtatgta 73

             
Query: 62 ttt 64
          |||
Sbjct: 74 ttt 76




>32648_rno-mir-1:mirbase
          Length = 87

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| | ||||||||||| | | | |||||||||||||||||||| ||||
Sbjct: 15 acatacttctttatgtacccatatgaacatagaatgctatggaatgtaaagaagtgtgta 74

             
Query: 62 ttt 64
          |||
Sbjct: 75 ttt 77




>33064_rno-mir-3571:mirbase
          Length = 111

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| | ||||||||||| | | | |||||||||||||||||||| ||||
Sbjct: 84 acatacttctttatgtacccatatgaacatagaatgctatggaatgtaaagaagtgtgta 25

             
Query: 62 ttt 64
          |||
Sbjct: 24 ttt 22




>33120_bta-mir-1-2:mirbase
          Length = 85

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| | ||||||||||| |   | |||||||||||||||||||||||||
Sbjct: 14 acatacttctttatgtacccatatgaacatacaatgctatggaatgtaaagaagtatgta 73

             
Query: 62 ttt 64
          |||
Sbjct: 74 ttt 76




>34185_dre-mir-1-2:mirbase
          Length = 87

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 57/63 (90%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaa-gctatggaatgtaaagaagtatgt 60
          |||||||||||||| ||||||||||||| |   || ||||||||||||||||||||||||
Sbjct: 14 acatacttctttatgtgcccatatgaacatataaaagctatggaatgtaaagaagtatgt 73

             
Query: 61 att 63
          |||
Sbjct: 74 att 76




>26614_cfa-mir-1-2:mirbase
          Length = 59

 Score = 61.9 bits (31), Expect = 5e-11
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                     
Query: 3  catacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          ||||||||||||| | ||||||||||| |   | |||||||||||||||||||||||||
Sbjct: 1  catacttctttatgtacccatatgaacatacaatgctatggaatgtaaagaagtatgta 59




>31764_mmu-mir-1a-2:mirbase
          Length = 72

 Score = 61.9 bits (31), Expect = 5e-11
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
          |||||||||||||| | ||||||||||| |     |||||||||||||||||||||||||
Sbjct: 8  acatacttctttatgtacccatatgaacattcagtgctatggaatgtaaagaagtatgta 67

             
Query: 62 ttt 64
          |||
Sbjct: 68 ttt 70




>31765_mmu-mir-1b:mirbase
          Length = 122

 Score = 61.9 bits (31), Expect = 5e-11
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 2   acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
           |||||||||||||| | ||||||||||| |     |||||||||||||||||||||||||
Sbjct: 100 acatacttctttatgtacccatatgaacattcagtgctatggaatgtaaagaagtatgta 41

              
Query: 62  ttt 64
           |||
Sbjct: 40  ttt 38




>31766_mmu-mir-1b:mirbase
          Length = 122

 Score = 61.9 bits (31), Expect = 5e-11
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                       
Query: 2   acatacttctttatatgcccatatgaacctggcaagctatggaatgtaaagaagtatgta 61
           |||||||||||||| | ||||||||||| |     |||||||||||||||||||||||||
Sbjct: 100 acatacttctttatgtacccatatgaacattcagtgctatggaatgtaaagaagtatgta 41

              
Query: 62  ttt 64
           |||
Sbjct: 40  ttt 38




>38847_lgi-mir-1:mirbase
          Length = 92

 Score = 56.0 bits (28), Expect = 3e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 37 gctatggaatgtaaagaagtatgtattt 64
          ||||||||||||||||||||||||||||
Sbjct: 52 gctatggaatgtaaagaagtatgtattt 79




>34683_tni-mir-1:mirbase
          Length = 92

 Score = 54.0 bits (27), Expect = 1e-08
 Identities = 55/63 (87%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                      
Query: 2  acatacttctttatatgcccatatgaacctggca-agctatggaatgtaaagaagtatgt 60
          |||||||||||||| | ||||||||||| |   | | |||||||||||||||||||||||
Sbjct: 17 acatacttctttatgtacccatatgaacatatgataactatggaatgtaaagaagtatgt 76

             
Query: 61 att 63
          |||
Sbjct: 77 att 79




>25417_pma-mir-1c:mirbase
          Length = 92

 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 36 agctatggaatgtaaagaagtatgta 61
          ||||||||||||||||||||||||||
Sbjct: 52 agctatggaatgtaaagaagtatgta 77




>25654_xla-mir-1b:mirbase
          Length = 59

 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 55/61 (90%), Gaps = 4/61 (6%)
 Strand = Plus / Plus

                                                                      
Query: 3  catacttctttatatgcccata-tgaacctggcaa-gctatggaatgtaaagaagtatgt 60
          |||||||||||||||||||||| ||||  || ||| |||||||||||| |||||||||||
Sbjct: 1  catacttctttatatgcccatactgaa--tgccaatgctatggaatgttaagaagtatgt 58

           
Query: 61 a 61
          |
Sbjct: 59 a 59




>34535_fru-mir-1:mirbase
          Length = 76

 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 38 ctatggaatgtaaagaagtatgtatt 63
          ||||||||||||||||||||||||||
Sbjct: 46 ctatggaatgtaaagaagtatgtatt 71




>34806_spu-mir-1:mirbase
          Length = 96

 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 38 ctatggaatgtaaagaagtatgtatt 63
          ||||||||||||||||||||||||||
Sbjct: 57 ctatggaatgtaaagaagtatgtatt 82




>24644_bfl-mir-1:mirbase
          Length = 96

 Score = 48.1 bits (24), Expect = 8e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 39 tatggaatgtaaagaagtatgtat 62
          ||||||||||||||||||||||||
Sbjct: 54 tatggaatgtaaagaagtatgtat 77




>38719_cte-mir-1:mirbase
          Length = 94

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 39 tatggaatgtaaagaagtatgta 61
          |||||||||||||||||||||||
Sbjct: 57 tatggaatgtaaagaagtatgta 79




>38595_ppc-mir-1:mirbase
          Length = 104

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 39 tatggaatgtaaagaagtatgta 61
          |||||||||||||||||||||||
Sbjct: 65 tatggaatgtaaagaagtatgta 87




>38486_crm-mir-1:mirbase
          Length = 96

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 39 tatggaatgtaaagaagtatgta 61
          |||||||||||||||||||||||
Sbjct: 53 tatggaatgtaaagaagtatgta 75




>25686_xtr-mir-1b:mirbase
          Length = 62

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 2  acatacttctttatatgcccata 24
          |||||||||||||||||||||||
Sbjct: 3  acatacttctttatatgcccata 25




>38126_cbr-mir-1:mirbase
          Length = 94

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 39 tatggaatgtaaagaagtatgta 61
          |||||||||||||||||||||||
Sbjct: 54 tatggaatgtaaagaagtatgta 76




>38266_cel-mir-1:mirbase
          Length = 96

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 39 tatggaatgtaaagaagtatgta 61
          |||||||||||||||||||||||
Sbjct: 59 tatggaatgtaaagaagtatgta 81




>25346_odi-mir-1c:mirbase
          Length = 102

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 39 tatggaatgtaaagaagtatgt 60
          ||||||||||||||||||||||
Sbjct: 64 tatggaatgtaaagaagtatgt 85




>35270_aga-mir-1:mirbase
          Length = 98

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 38 ctatggaatgtaaagaagtatg 59
          ||||||||||||||||||||||
Sbjct: 59 ctatggaatgtaaagaagtatg 80




>24806_cin-mir-1:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 72 tatggaatgtaaagaagtatg 92




>24807_cin-mir-1:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 72 tatggaatgtaaagaagtatg 92




>25881_gga-mir-1b:mirbase
          Length = 64

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 2  acatacttctttatatgcccatatg 26
          ||||||||||| |||||||||||||
Sbjct: 1  acatacttcttcatatgcccatatg 25



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 39 tatggaatgtaaagaagtatgtat 62
          |||||||||| |||||||||||||
Sbjct: 40 tatggaatgttaagaagtatgtat 63




>34863_sko-mir-1:mirbase
          Length = 94

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 39 tatggaatgtaaagaagtatgtatt 63
          |||||||||||| ||||||||||||
Sbjct: 56 tatggaatgtaatgaagtatgtatt 80




>34959_isc-mir-1:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 54 tatggaatgtaaagaagtatg 74




>34995_dpu-mir-1:mirbase
          Length = 94

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 56 tatggaatgtaaagaagtatg 76




>35042_api-mir-1:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 59 tatggaatgtaaagaagtatg 79




>35166_aae-mir-1:mirbase
          Length = 76

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 46 tatggaatgtaaagaagtatg 66




>35338_ame-mir-1-1:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 50 tatggaatgtaaagaagtatg 70




>35339_ame-mir-1-2:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 50 tatggaatgtaaagaagtatg 70




>35512_bmo-mir-1a:mirbase
          Length = 85

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 51 tatggaatgtaaagaagtatg 71




>35513_bmo-mir-1b:mirbase
          Length = 79

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 32 tatggaatgtaaagaagtatg 12




>36003_cqu-mir-1:mirbase
          Length = 77

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 47 tatggaatgtaaagaagtatg 67




>36075_dan-mir-1:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 52 tatggaatgtaaagaagtatg 72




>36152_der-mir-1:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 52 tatggaatgtaaagaagtatg 72




>36235_dgr-mir-1:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 51 tatggaatgtaaagaagtatg 71




>36319_dme-mir-1:mirbase
          Length = 91

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 54 tatggaatgtaaagaagtatg 74




>36320_dme-mir-1:mirbase
          Length = 91

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 54 tatggaatgtaaagaagtatg 74




>36751_dmo-mir-1:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 54 tatggaatgtaaagaagtatg 74




>36824_dpe-mir-1:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 51 tatggaatgtaaagaagtatg 71




>36899_dps-mir-1:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 51 tatggaatgtaaagaagtatg 71




>37111_dse-mir-1:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 52 tatggaatgtaaagaagtatg 72




>37190_dsi-mir-1:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 52 tatggaatgtaaagaagtatg 72




>37327_dvi-mir-1:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 51 tatggaatgtaaagaagtatg 71




>37402_dwi-mir-1:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 53 tatggaatgtaaagaagtatg 73




>37480_dya-mir-1:mirbase
          Length = 89

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 53 tatggaatgtaaagaagtatg 73




>37569_ngi-mir-1:mirbase
          Length = 69

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 40 tatggaatgtaaagaagtatg 60




>37630_nvi-mir-1:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 48 tatggaatgtaaagaagtatg 68




>37685_tca-mir-1:mirbase
          Length = 72

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 45 tatggaatgtaaagaagtatg 65




>37686_tca-mir-1:mirbase
          Length = 72

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 39 tatggaatgtaaagaagtatg 59
          |||||||||||||||||||||
Sbjct: 45 tatggaatgtaaagaagtatg 65




>25415_pma-mir-1a:mirbase
          Length = 85

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 38 ctatggaatgtaaagaagta 57
          ||||||||||||||||||||
Sbjct: 50 ctatggaatgtaaagaagta 69




>25829_xtr-mir-206:mirbase
          Length = 70

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 2  acatacttctttatatgcccatatgaac 29
          |||| ||||||||||| |||||||||||
Sbjct: 7  acatgcttctttatatacccatatgaac 34




>25416_pma-mir-1b:mirbase
          Length = 86

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 41 tggaatgtaaagaagtatg 59
          |||||||||||||||||||
Sbjct: 54 tggaatgtaaagaagtatg 72




>25418_pma-mir-1d:mirbase
          Length = 100

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 41 tggaatgtaaagaagtatg 59
          |||||||||||||||||||
Sbjct: 40 tggaatgtaaagaagtatg 22




>27424_mdo-mir-206:mirbase
          Length = 76

 Score = 38.2 bits (19), Expect = 8e-04
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 2  acatacttctttatatgcccatatgaa 28
          |||| ||||||||||| ||||||||||
Sbjct: 7  acatgcttctttatatccccatatgaa 33