miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25891_gga-mir-15a:mirbase
Length = 83
Score = 141 bits (71), Expect = 7e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 tggcataacgtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tggcataacgtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgt 63
Query: 61 gctgcctcaaa 71
|||||||||||
Sbjct: 64 gctgcctcaaa 74
>27333_mdo-mir-15a:mirbase
Length = 83
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 13 gtagcagcacataatggtttgttggttttgaaaaggtgcaggccatattgtgctgcctca 72
Query: 70 aa 71
||
Sbjct: 73 aa 74
>27478_age-mir-15a:mirbase
Length = 83
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 72
Query: 70 aa 71
||
Sbjct: 73 aa 74
>27539_lla-mir-15a:mirbase
Length = 83
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 72
Query: 70 aa 71
||
Sbjct: 73 aa 74
>27588_sla-mir-15a:mirbase
Length = 83
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 72
Query: 70 aa 71
||
Sbjct: 73 aa 74
>27650_mml-mir-15a:mirbase
Length = 83
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 72
Query: 70 aa 71
||
Sbjct: 73 aa 74
>28170_mne-mir-15a:mirbase
Length = 83
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 72
Query: 70 aa 71
||
Sbjct: 73 aa 74
>28258_ggo-mir-15a:mirbase
Length = 83
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 72
Query: 70 aa 71
||
Sbjct: 73 aa 74
>28360_hsa-mir-15a:mirbase
Length = 83
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 72
Query: 70 aa 71
||
Sbjct: 73 aa 74
>30042_ppa-mir-15a:mirbase
Length = 83
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 72
Query: 70 aa 71
||
Sbjct: 73 aa 74
>30146_ptr-mir-15a:mirbase
Length = 83
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 72
Query: 70 aa 71
||
Sbjct: 73 aa 74
>30751_ppy-mir-15a:mirbase
Length = 83
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 72
Query: 70 aa 71
||
Sbjct: 73 aa 74
>31393_lca-mir-15a:mirbase
Length = 83
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 72
Query: 70 aa 71
||
Sbjct: 73 aa 74
>33128_bta-mir-15a:mirbase
Length = 83
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13 gtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 72
Query: 70 aa 71
||
Sbjct: 73 aa 74
>33911_ssc-mir-15a:mirbase
Length = 79
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 11 gtagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 70
Query: 70 aa 71
||
Sbjct: 71 aa 72
>26623_cfa-mir-15a:mirbase
Length = 59
Score = 109 bits (55), Expect = 3e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 11 tagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 tagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcctca 59
>26945_eca-mir-15a:mirbase
Length = 57
Score = 105 bits (53), Expect = 4e-24
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 11 tagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcct 67
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 tagcagcacataatggtttgtggattttgaaaaggtgcaggccatattgtgctgcct 57
>31775_mmu-mir-15a:mirbase
Length = 84
Score = 99.6 bits (50), Expect = 2e-22
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
|||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 14 gtagcagcacataatggtttgtggatgttgaaaaggtgcaggccatactgtgctgcctca 73
Query: 70 aa 71
||
Sbjct: 74 aa 75
>31425_oan-mir-15a:mirbase
Length = 98
Score = 79.8 bits (40), Expect = 2e-16
Identities = 57/62 (91%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcctca 69
||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||
Sbjct: 20 gtagcagcacataatggtttgtgagttttgaaa---tacaggccatattgtgctgcctca 76
Query: 70 aa 71
||
Sbjct: 77 aa 78
>25697_xtr-mir-15a:mirbase
Length = 83
Score = 65.9 bits (33), Expect = 3e-12
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggttttgaaaaggtgcaggccatattgtgctgcc 66
||||||||||||||||||||||||||| | |||||||||||||| |||||||||
Sbjct: 13 gtagcagcacataatggtttgtgggttacacagaggtgcaggccatactgtgctgcc 69
>34203_dre-mir-15a-2:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgg 33
||||||||||| ||||||||||||
Sbjct: 24 gtagcagcacagaatggtttgtgg 47
>34202_dre-mir-15a-1:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtg 32
||||||||||| |||||||||||
Sbjct: 13 gtagcagcacagaatggtttgtg 35
>34545_fru-mir-15a:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 10 gtagcagcacataatggtttgtgggtt 36
|||||||||| |||||||||||||||
Sbjct: 12 gtagcagcacggaatggtttgtgggtt 38
