miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25892_gga-mir-15b:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 tagcagcacatcatggtttgcatgct 36
||||||||||||||||||||||||||
Sbjct: 19 tagcagcacatcatggtttgcatgct 44
>28259_ggo-mir-15b:mirbase
Length = 98
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 aagtgctgtagcagcacatcatggtttgcatgct 36
|||| |||||||||||||||||||||| ||||||
Sbjct: 12 aagtactgtagcagcacatcatggtttacatgct 45
>28361_hsa-mir-15b:mirbase
Length = 98
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 aagtgctgtagcagcacatcatggtttgcatgct 36
|||| |||||||||||||||||||||| ||||||
Sbjct: 12 aagtactgtagcagcacatcatggtttacatgct 45
>30043_ppa-mir-15b:mirbase
Length = 98
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 aagtgctgtagcagcacatcatggtttgcatgct 36
|||| |||||||||||||||||||||| ||||||
Sbjct: 12 aagtactgtagcagcacatcatggtttacatgct 45
>30147_ptr-mir-15b:mirbase
Length = 98
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 aagtgctgtagcagcacatcatggtttgcatgct 36
|||| |||||||||||||||||||||| ||||||
Sbjct: 12 aagtactgtagcagcacatcatggtttacatgct 45
>30752_ppy-mir-15b:mirbase
Length = 98
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 aagtgctgtagcagcacatcatggtttgcatgct 36
|||| |||||||||||||||||||||| ||||||
Sbjct: 12 aagtactgtagcagcacatcatggtttacatgct 45
>31426_oan-mir-15b:mirbase
Length = 130
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 6 tgctgtagcagcacatcatggtttgcatg 34
|||| ||||||||||||||||||||||||
Sbjct: 26 tgctatagcagcacatcatggtttgcatg 54
>25698_xtr-mir-15b:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggtttgcatgct 36
||||||||||||||||| ||||||||||
Sbjct: 14 tgtagcagcacatcatgatttgcatgct 41
>27479_age-mir-15b:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 aagtgctgtagcagcacatcatggttt 29
|||| ||||||||||||||||||||||
Sbjct: 12 aagtactgtagcagcacatcatggttt 38
>27540_lla-mir-15b:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 aagtgctgtagcagcacatcatggttt 29
|||| ||||||||||||||||||||||
Sbjct: 12 aagtactgtagcagcacatcatggttt 38
>27651_mml-mir-15b:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 aagtgctgtagcagcacatcatggttt 29
|||| ||||||||||||||||||||||
Sbjct: 12 aagtactgtagcagcacatcatggttt 38
>28171_mne-mir-15b:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 aagtgctgtagcagcacatcatggttt 29
|||| ||||||||||||||||||||||
Sbjct: 12 aagtactgtagcagcacatcatggttt 38
>32658_rno-mir-15b:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 aagtgctgtagcagcacatcatggttt 29
|||| ||||||||||||||||||||||
Sbjct: 12 aagtactgtagcagcacatcatggttt 38
>33129_bta-mir-15b:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 aagtgctgtagcagcacatcatggttt 29
|||| ||||||||||||||||||||||
Sbjct: 12 aagtactgtagcagcacatcatggttt 38
>33912_ssc-mir-15b:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 3 aagtgctgtagcagcacatcatggttt 29
|||| ||||||||||||||||||||||
Sbjct: 12 aagtactgtagcagcacatcatggttt 38
>34204_dre-mir-15b:mirbase
Length = 134
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 ctgtagcagcacatcatggtttg 30
|||||||||||||||||||||||
Sbjct: 36 ctgtagcagcacatcatggtttg 58
>25893_gga-mir-15c:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggtttg 30
||||||||||||||||||||||
Sbjct: 9 tgtagcagcacatcatggtttg 30
>26398_tgu-mir-15c:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggtttg 30
||||||||||||||||||||||
Sbjct: 12 tgtagcagcacatcatggtttg 33
>26946_eca-mir-15b:mirbase
Length = 64
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 ctgtagcagcacatcatggttt 29
||||||||||||||||||||||
Sbjct: 1 ctgtagcagcacatcatggttt 22
>31427_oan-mir-15c:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgtagcagcacatcatggtttg 30
||||||||||||||||||||||
Sbjct: 26 tgtagcagcacatcatggtttg 47
>31776_mmu-mir-15b:mirbase
Length = 64
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 ctgtagcagcacatcatggttt 29
||||||||||||||||||||||
Sbjct: 1 ctgtagcagcacatcatggttt 22
>25655_xla-mir-15c:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tagcagcacatcatggtttg 30
||||||||||||||||||||
Sbjct: 14 tagcagcacatcatggtttg 33
>25699_xtr-mir-15c:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tagcagcacatcatggtttg 30
||||||||||||||||||||
Sbjct: 14 tagcagcacatcatggtttg 33
>26624_cfa-mir-15b:mirbase
Length = 60
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 11 tagcagcacatcatggttt 29
|||||||||||||||||||
Sbjct: 1 tagcagcacatcatggttt 19
