miRNEST 2.0, an integrative microRNA resource :: BLAST
>41528_sly-MIR159:mirbase
Length = 177
Score = 337 bits (170), Expect = 2e-93
Identities = 177/178 (99%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 12 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 72 attcctcagccctatctatttatgatttcaaacatatagataggtttgtgggtttgcata 131
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 attcctcagccctatctatttatgatttcaaacatatagataggttt-tgggtttgcata 119
Query: 132 tgtcaggagctttattttaccctttgtttgatcattttttggattgaagggagctcta 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgtcaggagctttattttaccctttgtttgatcattttttggattgaagggagctcta 177
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 63.9 bits (32), Expect = 4e-11
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 8 ggagtggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacct 67
|||||||||||||||||||||||| | | ||| || || || |||||||||||||| |
Sbjct: 5 ggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactt 64
Query: 68 atggattcctcagccctatc 87
|||||| || ||||||||||
Sbjct: 65 atggatcccacagccctatc 84
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctaca 191
|||||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctctaca 182
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 60.0 bits (30), Expect = 7e-10
Identities = 57/65 (87%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 125 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 184
|||||||| |||||||||||||| ||| |||| |||| |||||||||||||||||||
Sbjct: 116 ttgcatatctcaggagctttatt--acctaatgttagatctttttttggattgaagggag 173
Query: 185 ctcta 189
|||||
Sbjct: 174 ctcta 178
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ggagtggagctccttgaagtccaa 31
||||||||||||||||||||||||
Sbjct: 7 ggagtggagctccttgaagtccaa 30
>41218_csi-MIR159:mirbase
Length = 216
Score = 56.0 bits (28), Expect = 1e-08
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 8 ggagtggagctccttgaagtccaacaaaaaatctaac-aggttaaattgagctgctgacc 66
|||||||||||||||||||||||| | | |||| | ||| |||||||||||||||| |
Sbjct: 8 ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67
Query: 67 tatggattcctcagccctat 86
||||||| || ||| |||||
Sbjct: 68 tatggatcccacagtcctat 87
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 166 ttttttggattgaagggagctctac 190
|||||||||||||||||||||||||
Sbjct: 183 ttttttggattgaagggagctctac 207
>40338_rco-MIR159:mirbase
Length = 180
Score = 52.0 bits (26), Expect = 2e-07
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 9 gagtggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgaccta 68
||||||||||||||||||||||| | | |||| || || ||||||||||||| |||
Sbjct: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
Query: 69 tggattcctcagccctat 86
||||| || |||||||||
Sbjct: 61 tggatcccacagccctat 78
Score = 50.1 bits (25), Expect = 6e-07
Identities = 58/68 (85%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 125 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 184
|||||||| |||||||||| ||| ||| | | || |||| || ||||||||||||||||
Sbjct: 113 ttgcatatctcaggagcttcatt--accttgtattagatccttgtttggattgaagggag 170
Query: 185 ctctacat 192
||||||||
Sbjct: 171 ctctacat 178
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gggagtggagctccttgaagtccaa 31
|||||||||||||||||||||||||
Sbjct: 6 gggagtggagctccttgaagtccaa 30
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 167 tttttggattgaagggagctcta 189
|||||||||||||||||||||||
Sbjct: 152 tttttggattgaagggagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 7 gggagtggagctccttgaagtccaa 31
|||||||||||||||||||||||||
Sbjct: 6 gggagtggagctccttgaagtccaa 30
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 167 tttttggattgaagggagctcta 189
|||||||||||||||||||||||
Sbjct: 152 tttttggattgaagggagctcta 174
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctacat 192
||||||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctctacat 175
>40397_ahy-MIR159:mirbase
Length = 197
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 agtggagctccttgaagtccaaca 33
||||||||||||||||||||||||
Sbjct: 1 agtggagctccttgaagtccaaca 24
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctacat 192
||||||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctctacat 180
>39804_aly-MIR159a:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctacat 192
||||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctacat 206
>40432_gma-MIR159a:mirbase
Length = 214
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctaca 191
|||||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctctaca 197
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 agtggagctccttgaagtccaa 31
||||||||||||||||||||||
Sbjct: 19 agtggagctccttgaagtccaa 40
>40311_bra-MIR159a:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctaca 191
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctaca 191
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>41922_osa-MIR159f:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 170 ttggattgaagggagctctaca 191
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctac 190
||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaa 31
|||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaa 21
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctac 190
||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaa 31
|||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaa 21
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctac 190
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
