miRNEST 2.0, an integrative microRNA resource :: BLAST
>29230_hsa-mir-3074:mirbase
Length = 81
Score = 145 bits (73), Expect = 9e-36
Identities = 79/81 (97%)
Strand = Plus / Minus
Query: 51 acccgtcctccggtgcctactgagctgatatcagttctgattttacacactggctcagtt 110
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 81 acccgccctccggtgcctactgagctgatatcagttctcattttacacactggctcagtt 22
Query: 111 cagcaggaacaggagtcgagc 131
|||||||||||||||||||||
Sbjct: 21 cagcaggaacaggagtcgagc 1
>29231_hsa-mir-3074:mirbase
Length = 81
Score = 145 bits (73), Expect = 9e-36
Identities = 79/81 (97%)
Strand = Plus / Minus
Query: 51 acccgtcctccggtgcctactgagctgatatcagttctgattttacacactggctcagtt 110
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 81 acccgccctccggtgcctactgagctgatatcagttctcattttacacactggctcagtt 22
Query: 111 cagcaggaacaggagtcgagc 131
|||||||||||||||||||||
Sbjct: 21 cagcaggaacaggagtcgagc 1
>33024_rno-mir-3074:mirbase
Length = 117
Score = 145 bits (73), Expect = 9e-36
Identities = 82/85 (96%)
Strand = Plus / Minus
Query: 48 tggacccgtcctccggtgcctactgagctgatatcagttctgattttacacactggctca 107
|||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 99 tggacccgccctccggtgcctactgagctgatatcagttctcatttcacacactggctca 40
Query: 108 gttcagcaggaacaggagtcgagcc 132
|||||||||||||||||||||||||
Sbjct: 39 gttcagcaggaacaggagtcgagcc 15
>32511_mmu-mir-3074-1:mirbase
Length = 85
Score = 143 bits (72), Expect = 4e-35
Identities = 81/84 (96%)
Strand = Plus / Minus
Query: 49 ggacccgtcctccggtgcctactgagctgatatcagttctgattttacacactggctcag 108
||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 85 ggacccgccctccggtgcctactgagctgatatcagttctcatttcacacactggctcag 26
Query: 109 ttcagcaggaacaggagtcgagcc 132
||||||||||||||||||||||||
Sbjct: 25 ttcagcaggaacaggagtcgagcc 2
>32512_mmu-mir-3074-1:mirbase
Length = 85
Score = 143 bits (72), Expect = 4e-35
Identities = 81/84 (96%)
Strand = Plus / Minus
Query: 49 ggacccgtcctccggtgcctactgagctgatatcagttctgattttacacactggctcag 108
||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 85 ggacccgccctccggtgcctactgagctgatatcagttctcatttcacacactggctcag 26
Query: 109 ttcagcaggaacaggagtcgagcc 132
||||||||||||||||||||||||
Sbjct: 25 ttcagcaggaacaggagtcgagcc 2
>33929_ssc-mir-24-2:mirbase
Length = 80
Score = 143 bits (72), Expect = 4e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 50 gacccgtcctccggtgcctactgagctgatatcagttctgattttacacactggctcagt 109
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 gacccgccctccggtgcctactgagctgatatcagttctcattttacacactggctcagt 60
Query: 110 tcagcaggaacaggagtcga 129
||||||||||||||||||||
Sbjct: 61 tcagcaggaacaggagtcga 80
>25908_gga-mir-24:mirbase
Length = 68
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 58 ctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcagg 117
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctgattttacatactggctcagttcagcagg 60
Query: 118 aacaggag 125
||||||||
Sbjct: 61 aacaggag 68
>26962_eca-mir-24-2:mirbase
Length = 68
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 58 ctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcagg 117
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagg 60
Query: 118 aacaggag 125
||||||||
Sbjct: 61 aacaggag 68
>27667_mml-mir-24-1:mirbase
Length = 68
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 58 ctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcagg 117
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagg 60
Query: 118 aacaggag 125
||||||||
Sbjct: 61 aacaggag 68
>28183_mne-mir-24-1:mirbase
Length = 68
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 58 ctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcagg 117
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagg 60
Query: 118 aacaggag 125
||||||||
Sbjct: 61 aacaggag 68
>28377_hsa-mir-24-1:mirbase
Length = 68
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 58 ctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcagg 117
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagg 60
Query: 118 aacaggag 125
||||||||
Sbjct: 61 aacaggag 68
>30056_ppa-mir-24-1:mirbase
Length = 68
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 58 ctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcagg 117
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagg 60
Query: 118 aacaggag 125
||||||||
Sbjct: 61 aacaggag 68
>30768_ppy-mir-24-1:mirbase
Length = 68
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 58 ctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcagg 117
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagg 60
Query: 118 aacaggag 125
||||||||
Sbjct: 61 aacaggag 68
>33147_bta-mir-24-1:mirbase
Length = 68
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 58 ctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcagg 117
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagg 60
Query: 118 aacaggag 125
||||||||
Sbjct: 61 aacaggag 68
>30163_ptr-mir-24-1:mirbase
Length = 67
Score = 125 bits (63), Expect = 9e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 59 tccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcagga 118
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 tccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagga 60
Query: 119 acaggag 125
|||||||
Sbjct: 61 acaggag 67
>31791_mmu-mir-24-1:mirbase
Length = 68
Score = 119 bits (60), Expect = 5e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 58 ctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcagg 117
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagcagg 60
Query: 118 aacaggag 125
||||||||
Sbjct: 61 aacaggag 68
>32675_rno-mir-24-1:mirbase
Length = 68
Score = 119 bits (60), Expect = 5e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 58 ctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcagg 117
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagcagg 60
Query: 118 aacaggag 125
||||||||
Sbjct: 61 aacaggag 68
>26639_cfa-mir-24-1:mirbase
Length = 62
Score = 107 bits (54), Expect = 2e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 62 ggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcaggaaca 121
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 1 ggtgcctactgagctgatatcagttctcattgtacacactggctcagttcagcaggaaca 60
Query: 122 gg 123
||
Sbjct: 61 gg 62
>27345_mdo-mir-24-1:mirbase
Length = 57
Score = 105 bits (53), Expect = 8e-24
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 62 ggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcagga 118
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgcctactgagctgataacagttctgattttacacactggctcagttcagcagga 57
>25716_xtr-mir-24a:mirbase
Length = 67
Score = 93.7 bits (47), Expect = 3e-20
Identities = 60/63 (95%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 63 gtgcctactgagctgatatcagttctgattttacacactggctcagttcagcaggaacag 122
||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 6 gtgcctactgaactgatatcagttct-atttcacacactggctcagttcagcaggaacag 64
Query: 123 gag 125
|||
Sbjct: 65 gag 67
>25717_xtr-mir-24a:mirbase
Length = 67
Score = 93.7 bits (47), Expect = 3e-20
Identities = 60/63 (95%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 63 gtgcctactgagctgatatcagttctgattttacacactggctcagttcagcaggaacag 122
||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 6 gtgcctactgaactgatatcagttct-atttcacacactggctcagttcagcaggaacag 64
Query: 123 gag 125
|||
Sbjct: 65 gag 67
>31442_oan-mir-24:mirbase
Length = 84
Score = 83.8 bits (42), Expect = 3e-17
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 57 cctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcag 116
||||| |||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 9 cctccagtgcctactgagctgatatcagttctcgttg-acccactggctcagttcagcag 67
Query: 117 gaacaggagt 126
||||||||||
Sbjct: 68 gaacaggagt 77
>34230_dre-mir-24-3:mirbase
Length = 142
Score = 63.9 bits (32), Expect = 3e-11
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 57 cctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcag 116
||||| ||||||||||||||||| |||| ||| | | ||||||||||||||||||||
Sbjct: 38 cctcccgtgcctactgagctgattacagtactg--tgcaaacactggctcagttcagcag 95
Query: 117 gaacaggagtc 127
|||||||||||
Sbjct: 96 gaacaggagtc 106
>31792_mmu-mir-24-2:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 98 cactggctcagttcagcaggaacaggagtcgagcc 132
|||||||||||||||||||||||||||||| ||||
Sbjct: 58 cactggctcagttcagcaggaacaggagtccagcc 92
>32513_mmu-mir-3074-2:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 98 cactggctcagttcagcaggaacaggagtcgagcc 132
|||||||||||||||||||||||||||||| ||||
Sbjct: 36 cactggctcagttcagcaggaacaggagtccagcc 2
>32514_mmu-mir-3074-2:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 98 cactggctcagttcagcaggaacaggagtcgagcc 132
|||||||||||||||||||||||||||||| ||||
Sbjct: 36 cactggctcagttcagcaggaacaggagtccagcc 2
>32676_rno-mir-24-2:mirbase
Length = 108
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 98 cactggctcagttcagcaggaacaggagtcgagcc 132
|||||||||||||||||||||||||||||| ||||
Sbjct: 58 cactggctcagttcagcaggaacaggagtccagcc 92
>34228_dre-mir-24-1:mirbase
Length = 80
Score = 60.0 bits (30), Expect = 4e-10
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 58 ctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcagg 117
||||||||||| ||||||||||||||||| | | | ||||||||||||||||||||
Sbjct: 8 ctccggtgccttctgagctgatatcagttgtagta--aatcactggctcagttcagcagg 65
Query: 118 aacaggagt 126
|||||||||
Sbjct: 66 aacaggagt 74
>34709_tni-mir-24-1:mirbase
Length = 70
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 98 cactggctcagttcagcaggaacaggagtc 127
||||||||||||||||||||||||||||||
Sbjct: 41 cactggctcagttcagcaggaacaggagtc 70
>27346_mdo-mir-24-2:mirbase
Length = 73
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 99 actggctcagttcagcaggaacaggagtc 127
|||||||||||||||||||||||||||||
Sbjct: 44 actggctcagttcagcaggaacaggagtc 72
>27668_mml-mir-24-2:mirbase
Length = 73
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 96 cacactggctcagttcagcaggaacagga 124
|||||||||||||||||||||||||||||
Sbjct: 45 cacactggctcagttcagcaggaacagga 73
>28184_mne-mir-24-2:mirbase
Length = 73
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 96 cacactggctcagttcagcaggaacagga 124
|||||||||||||||||||||||||||||
Sbjct: 45 cacactggctcagttcagcaggaacagga 73
>33148_bta-mir-24-2:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 96 cacactggctcagttcagcaggaacagg 123
||||||||||||||||||||||||||||
Sbjct: 45 cacactggctcagttcagcaggaacagg 72
>34561_fru-mir-24-1:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 99 actggctcagttcagcaggaacaggagt 126
||||||||||||||||||||||||||||
Sbjct: 52 actggctcagttcagcaggaacaggagt 79
>34562_fru-mir-24-1:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 99 actggctcagttcagcaggaacaggagt 126
||||||||||||||||||||||||||||
Sbjct: 52 actggctcagttcagcaggaacaggagt 79
>26961_eca-mir-24:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 99 actggctcagttcagcaggaacaggag 125
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>28270_ggo-mir-24:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 97 acactggctcagttcagcaggaacagg 123
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
>28378_hsa-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 97 acactggctcagttcagcaggaacagg 123
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
>30057_ppa-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 97 acactggctcagttcagcaggaacagg 123
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
>30164_ptr-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 97 acactggctcagttcagcaggaacagg 123
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
>30769_ppy-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 97 acactggctcagttcagcaggaacagg 123
|||||||||||||||||||||||||||
Sbjct: 46 acactggctcagttcagcaggaacagg 72
>25444_pma-mir-24:mirbase
Length = 94
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 98 cactggctcagttcagcaggaacaggagtc 127
||||||||||||||||||||||||| ||||
Sbjct: 55 cactggctcagttcagcaggaacagaagtc 84
>26640_cfa-mir-24-2:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 99 actggctcagttcagcaggaacagg 123
|||||||||||||||||||||||||
Sbjct: 38 actggctcagttcagcaggaacagg 62
>33928_ssc-mir-24-1:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 99 actggctcagttcagcaggaacagg 123
|||||||||||||||||||||||||
Sbjct: 48 actggctcagttcagcaggaacagg 72
>34229_dre-mir-24-2:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 99 actggctcagttcagcaggaacagg 123
|||||||||||||||||||||||||
Sbjct: 49 actggctcagttcagcaggaacagg 73
>34231_dre-mir-24-4:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 100 ctggctcagttcagcaggaacagg 123
||||||||||||||||||||||||
Sbjct: 55 ctggctcagttcagcaggaacagg 78
>34563_fru-mir-24-2:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 100 ctggctcagttcagcaggaacagg 123
||||||||||||||||||||||||
Sbjct: 50 ctggctcagttcagcaggaacagg 73
>34710_tni-mir-24-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 100 ctggctcagttcagcaggaacagg 123
||||||||||||||||||||||||
Sbjct: 50 ctggctcagttcagcaggaacagg 73
