miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25923_gga-mir-32:mirbase
Length = 70
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcagtgcaatttagtgtgtg 60
Query: 66 cgatac 71
||||||
Sbjct: 61 cgatac 66
>26981_eca-mir-32:mirbase
Length = 70
Score = 113 bits (57), Expect = 2e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ggagatattgcacattactaagttgcacgttgtcacggcctcagtgcaatttagtgtgtg 60
Query: 66 cgata 70
||||
Sbjct: 61 tgata 65
>31457_oan-mir-32:mirbase
Length = 116
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 1 ctggtggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagt 60
|||||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||||||
Sbjct: 18 ctggtggagatattgcacattactaagttgcatgttgtcaaggcctctgtgcaatttagt 77
Query: 61 gtgtgcgata 70
||||||||||
Sbjct: 78 gtgtgcgata 87
>33947_ssc-mir-32:mirbase
Length = 70
Score = 105 bits (53), Expect = 4e-24
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcagtgcaatttagtgtgtg 60
Query: 66 cgata 70
||||
Sbjct: 61 tgata 65
>27603_sla-mir-32:mirbase
Length = 70
Score = 97.6 bits (49), Expect = 1e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 66 cgata 70
||||
Sbjct: 61 tgata 65
>27688_mml-mir-32:mirbase
Length = 70
Score = 97.6 bits (49), Expect = 1e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 66 cgata 70
||||
Sbjct: 61 tgata 65
>28195_mne-mir-32:mirbase
Length = 70
Score = 97.6 bits (49), Expect = 1e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 66 cgata 70
||||
Sbjct: 61 tgata 65
>28283_ggo-mir-32:mirbase
Length = 70
Score = 97.6 bits (49), Expect = 1e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 66 cgata 70
||||
Sbjct: 61 tgata 65
>28398_hsa-mir-32:mirbase
Length = 70
Score = 97.6 bits (49), Expect = 1e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 66 cgata 70
||||
Sbjct: 61 tgata 65
>30070_ppa-mir-32:mirbase
Length = 70
Score = 97.6 bits (49), Expect = 1e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 66 cgata 70
||||
Sbjct: 61 tgata 65
>30184_ptr-mir-32:mirbase
Length = 70
Score = 97.6 bits (49), Expect = 1e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 66 cgata 70
||||
Sbjct: 61 tgata 65
>30788_ppy-mir-32:mirbase
Length = 70
Score = 97.6 bits (49), Expect = 1e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 66 cgata 70
||||
Sbjct: 61 tgata 65
>31813_mmu-mir-32:mirbase
Length = 70
Score = 97.6 bits (49), Expect = 1e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtg 60
Query: 66 cgata 70
||||
Sbjct: 61 tgata 65
>32695_rno-mir-32:mirbase
Length = 70
Score = 91.7 bits (46), Expect = 6e-20
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 9 gatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtgcga 68
|||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||| ||
Sbjct: 4 gatattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtgtga 63
Query: 69 ta 70
||
Sbjct: 64 ta 65
>26660_cfa-mir-32:mirbase
Length = 62
Score = 87.7 bits (44), Expect = 9e-19
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 11 tattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtgcgata 70
|||||||||||||||||||||| ||| ||||||||||| |||||||||||||||| ||||
Sbjct: 1 tattgcacattactaagttgcatgttgtcacggcctcaatgcaatttagtgtgtgtgata 60
>27358_mdo-mir-32:mirbase
Length = 69
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
||||||||||||||||||||||||||| ||| ||||||| | ||||||||||||| ||||
Sbjct: 1 ggagatattgcacattactaagttgcatgttgtcacggctttagtgcaatttagtatgtg 60
Query: 66 cgata 70
||||
Sbjct: 61 tgata 65
>33172_bta-mir-32:mirbase
Length = 70
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 6 ggagatattgcacattactaagttgcacgttctcacggcctcagtgcaatttagtgtgtg 65
|||| |||||||||| ||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 1 ggaggtattgcacatgactaagttgcatgttgtcacggcctcagtgcaatttagtatgtg 60
Query: 66 cgata 70
||||
Sbjct: 61 tgata 65
