miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25927_gga-mir-34c:mirbase
Length = 74
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 29 agcctggttgccaggcagtgtagttagctgattgcc 64
||||||||| ||||||||||||||||||||||||||
Sbjct: 1 agcctggttaccaggcagtgtagttagctgattgcc 36
>31462_oan-mir-34:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 5e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 22 tgccatcagcctggttgccaggcagtgtagttagctgattgc 63
||||||||| || ||| | |||||||||||||||||||||||
Sbjct: 2 tgccatcagtctagttactaggcagtgtagttagctgattgc 43
>27693_mml-mir-34c:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 39 ccaggcagtgtagttagctgattgc 63
|||||||||||||||||||||||||
Sbjct: 11 ccaggcagtgtagttagctgattgc 35
>27694_mml-mir-34c:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 39 ccaggcagtgtagttagctgattgc 63
|||||||||||||||||||||||||
Sbjct: 11 ccaggcagtgtagttagctgattgc 35
>25743_xtr-mir-34b-1:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 caggcagtgtagttagctgattg 62
|||||||||||||||||||||||
Sbjct: 12 caggcagtgtagttagctgattg 34
>25744_xtr-mir-34b-2:mirbase
Length = 67
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 caggcagtgtagttagctgattg 62
|||||||||||||||||||||||
Sbjct: 3 caggcagtgtagttagctgattg 25
>25745_xtr-mir-34b-3:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 caggcagtgtagttagctgattg 62
|||||||||||||||||||||||
Sbjct: 12 caggcagtgtagttagctgattg 34
>25746_xtr-mir-34b-4:mirbase
Length = 67
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 caggcagtgtagttagctgattg 62
|||||||||||||||||||||||
Sbjct: 3 caggcagtgtagttagctgattg 25
>25926_gga-mir-34b:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 caggcagtgtagttagctgattg 62
|||||||||||||||||||||||
Sbjct: 13 caggcagtgtagttagctgattg 35
>26434_tgu-mir-34c-1:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 caggcagtgtagttagctgattg 62
|||||||||||||||||||||||
Sbjct: 10 caggcagtgtagttagctgattg 32
>26435_tgu-mir-34c-2:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 40 caggcagtgtagttagctgattg 62
|||||||||||||||||||||||
Sbjct: 10 caggcagtgtagttagctgattg 32
>26665_cfa-mir-34c:mirbase
Length = 55
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 aggcagtgtagttagctgattgc 63
|||||||||||||||||||||||
Sbjct: 1 aggcagtgtagttagctgattgc 23
>26987_eca-mir-34c:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 aggcagtgtagttagctgattgc 63
|||||||||||||||||||||||
Sbjct: 13 aggcagtgtagttagctgattgc 35
>28403_hsa-mir-34c:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 aggcagtgtagttagctgattgc 63
|||||||||||||||||||||||
Sbjct: 13 aggcagtgtagttagctgattgc 35
>28404_hsa-mir-34c:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 aggcagtgtagttagctgattgc 63
|||||||||||||||||||||||
Sbjct: 13 aggcagtgtagttagctgattgc 35
>30189_ptr-mir-34c:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 aggcagtgtagttagctgattgc 63
|||||||||||||||||||||||
Sbjct: 12 aggcagtgtagttagctgattgc 34
>30793_ppy-mir-34c:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 aggcagtgtagttagctgattgc 63
|||||||||||||||||||||||
Sbjct: 13 aggcagtgtagttagctgattgc 35
>30794_ppy-mir-34c:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 aggcagtgtagttagctgattgc 63
|||||||||||||||||||||||
Sbjct: 13 aggcagtgtagttagctgattgc 35
>31818_mmu-mir-34c:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 aggcagtgtagttagctgattgc 63
|||||||||||||||||||||||
Sbjct: 13 aggcagtgtagttagctgattgc 35
>32699_rno-mir-34c:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 aggcagtgtagttagctgattgc 63
|||||||||||||||||||||||
Sbjct: 13 aggcagtgtagttagctgattgc 35
>33177_bta-mir-34c:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 aggcagtgtagttagctgattgc 63
|||||||||||||||||||||||
Sbjct: 13 aggcagtgtagttagctgattgc 35
>33949_ssc-mir-34c:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 aggcagtgtagttagctgattgc 63
|||||||||||||||||||||||
Sbjct: 13 aggcagtgtagttagctgattgc 35
