miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26438_tgu-mir-99-1:mirbase
Length = 71
Score = 141 bits (71), Expect = 7e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 aattggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttct 60
Query: 61 atgggtctgtg 71
|||||||||||
Sbjct: 61 atgggtctgtg 71
>25929_gga-mir-99a:mirbase
Length = 81
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 aattggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttct 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3 aattggcataaacccgtagatccgatcttgtgttgaaatgcactgcacaagctcgcttct 62
Query: 61 atgggtctgtg 71
|||||||||||
Sbjct: 63 atgggtctgtg 73
>27562_lla-mir-99a:mirbase
Length = 81
Score = 99.6 bits (50), Expect = 2e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 2 attggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttcta 61
||||||||||||||||||||||||||||||| |||| | || |||||||||||||||||
Sbjct: 4 attggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttcta 63
Query: 62 tgggtctgtg 71
||||||||||
Sbjct: 64 tgggtctgtg 73
>27702_mml-mir-99a:mirbase
Length = 81
Score = 99.6 bits (50), Expect = 2e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 2 attggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttcta 61
||||||||||||||||||||||||||||||| |||| | || |||||||||||||||||
Sbjct: 4 attggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttcta 63
Query: 62 tgggtctgtg 71
||||||||||
Sbjct: 64 tgggtctgtg 73
>28201_mne-mir-99a:mirbase
Length = 81
Score = 99.6 bits (50), Expect = 2e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 2 attggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttcta 61
||||||||||||||||||||||||||||||| |||| | || |||||||||||||||||
Sbjct: 4 attggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttcta 63
Query: 62 tgggtctgtg 71
||||||||||
Sbjct: 64 tgggtctgtg 73
>28292_ggo-mir-99a:mirbase
Length = 81
Score = 99.6 bits (50), Expect = 2e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 2 attggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttcta 61
||||||||||||||||||||||||||||||| |||| | || |||||||||||||||||
Sbjct: 4 attggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttcta 63
Query: 62 tgggtctgtg 71
||||||||||
Sbjct: 64 tgggtctgtg 73
>28412_hsa-mir-99a:mirbase
Length = 81
Score = 99.6 bits (50), Expect = 2e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 2 attggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttcta 61
||||||||||||||||||||||||||||||| |||| | || |||||||||||||||||
Sbjct: 4 attggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttcta 63
Query: 62 tgggtctgtg 71
||||||||||
Sbjct: 64 tgggtctgtg 73
>30079_ppa-mir-99a:mirbase
Length = 81
Score = 99.6 bits (50), Expect = 2e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 2 attggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttcta 61
||||||||||||||||||||||||||||||| |||| | || |||||||||||||||||
Sbjct: 4 attggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttcta 63
Query: 62 tgggtctgtg 71
||||||||||
Sbjct: 64 tgggtctgtg 73
>30196_ptr-mir-99a:mirbase
Length = 81
Score = 99.6 bits (50), Expect = 2e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 2 attggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttcta 61
||||||||||||||||||||||||||||||| |||| | || |||||||||||||||||
Sbjct: 4 attggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttcta 63
Query: 62 tgggtctgtg 71
||||||||||
Sbjct: 64 tgggtctgtg 73
>33185_bta-mir-99a:mirbase
Length = 81
Score = 99.6 bits (50), Expect = 2e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 2 attggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttcta 61
||||||||||||||||||||||||||||||| |||| | || |||||||||||||||||
Sbjct: 4 attggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttcta 63
Query: 62 tgggtctgtg 71
||||||||||
Sbjct: 64 tgggtctgtg 73
>33956_ssc-mir-99a:mirbase
Length = 80
Score = 99.6 bits (50), Expect = 2e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 2 attggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttcta 61
||||||||||||||||||||||||||||||| |||| | || |||||||||||||||||
Sbjct: 3 attggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgcttcta 62
Query: 62 tgggtctgtg 71
||||||||||
Sbjct: 63 tgggtctgtg 72
>26995_eca-mir-99a-2:mirbase
Length = 81
Score = 91.7 bits (46), Expect = 6e-20
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 2 attggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttcta 61
||||||||||||||||||||||||||||||| |||| | || ||||||||||||||||
Sbjct: 4 attggcataaacccgtagatccgatcttgtggtgaagtggacctcacaagctcgcttcta 63
Query: 62 tgggtctgtg 71
||||||||||
Sbjct: 64 tgggtctgtg 73
>30802_ppy-mir-99a:mirbase
Length = 81
Score = 91.7 bits (46), Expect = 6e-20
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 2 attggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttcta 61
||||||||||||||||||||||||||||||| | || | || |||||||||||||||||
Sbjct: 4 attggcataaacccgtagatccgatcttgtggtaaagtggaccgcacaagctcgcttcta 63
Query: 62 tgggtctgtg 71
||||||||||
Sbjct: 64 tgggtctgtg 73
>32706_rno-mir-99a:mirbase
Length = 81
Score = 91.7 bits (46), Expect = 6e-20
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 2 attggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttcta 61
||||||||||||||||||||||||||||||| |||| | || ||||||||||| |||||
Sbjct: 4 attggcataaacccgtagatccgatcttgtggtgaagtggaccgcacaagctcgtttcta 63
Query: 62 tgggtctgtg 71
||||||||||
Sbjct: 64 tgggtctgtg 73
>26673_cfa-mir-99a-1:mirbase
Length = 59
Score = 77.8 bits (39), Expect = 9e-16
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 11 aacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttctatgggtctg 69
|||||||||||||||||||||| |||| | || |||||||||||||||||||||||||
Sbjct: 1 aacccgtagatccgatcttgtggtgaagtggacggcacaagctcgcttctatgggtctg 59
>31470_oan-mir-99:mirbase
Length = 102
Score = 73.8 bits (37), Expect = 1e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 3 ttggcataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttctat 62
|||||||||||||||||||||||||||||| |||| | | | ||||||||||| ||| |
Sbjct: 16 ttggcataaacccgtagatccgatcttgtggtgaagtgaaatacacaagctcgcctctct 75
Query: 63 gggtctgtg 71
|||||||||
Sbjct: 76 gggtctgtg 84
>31825_mmu-mir-99a:mirbase
Length = 65
Score = 73.8 bits (37), Expect = 1e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 7 cataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttctatgggt 66
|||||||||||||||||||||||||| |||| | || || |||||||| ||||||||||
Sbjct: 1 cataaacccgtagatccgatcttgtggtgaagtggaccgcgcaagctcgtttctatgggt 60
Query: 67 ctgtg 71
|||||
Sbjct: 61 ctgtg 65
>25754_xtr-mir-99:mirbase
Length = 71
Score = 65.9 bits (33), Expect = 3e-12
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 7 cataaacccgtagatccgatcttgtgttgaaacgcactgcacaagctcgcttctatgggt 66
|||||||||||||||||||||||||| |||| | ||| |||||||| ||||||||||
Sbjct: 4 cataaacccgtagatccgatcttgtggtgaattcctttgctcaagctcgtttctatgggt 63
Query: 67 ctgtg 71
|||||
Sbjct: 64 ctgtg 68
>24672_bfl-mir-100:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 cataaacccgtagatccgatcttgtgttg 35
||||||||||||||||||| |||||||||
Sbjct: 17 cataaacccgtagatccgaacttgtgttg 45
>34262_dre-mir-99-2:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||||||||||
Sbjct: 11 aaacccgtagatccgatcttgtg 33
>25755_xtr-mir-100:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 cataaacccgtagatccgatcttgtg 32
||||||||||||||||||| ||||||
Sbjct: 6 cataaacccgtagatccgaacttgtg 31
>26674_cfa-mir-99a-2:mirbase
Length = 57
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 aacccgtagatccgatcttgtg 32
||||||||||||||||||||||
Sbjct: 1 aacccgtagatccgatcttgtg 22
>34261_dre-mir-99-1:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 aacccgtagatccgatcttgtg 32
||||||||||||||||||||||
Sbjct: 14 aacccgtagatccgatcttgtg 35
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 45 gcacaagctcgcttctatgggtct 68
||||||||||| ||||||||||||
Sbjct: 48 gcacaagctcgattctatgggtct 71
>34877_sko-mir-100:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 taaacccgtagatccgatcttgtgtt 34
||||||||||||||||| ||||||||
Sbjct: 19 taaacccgtagatccgaacttgtgtt 44
>38112_bma-mir-100b:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 aacccgtagatccgatcttgtgttga 36
||||||||||||||| ||||||||||
Sbjct: 21 aacccgtagatccgaacttgtgttga 46
>38866_lgi-mir-100:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 ataaacccgtagatccgatcttgtg 32
|||||||||||||||||| ||||||
Sbjct: 18 ataaacccgtagatccgaacttgtg 42
>25468_pma-mir-100a:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 16 aaacccgtagatccgaacttgtg 38
>25470_pma-mir-100c:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 71 aaacccgtagatccgaacttgtg 49
>25930_gga-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>26440_tgu-mir-100-1:mirbase
Length = 111
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 10 aaacccgtagatccgaacttgtg 32
>26441_tgu-mir-100-2:mirbase
Length = 111
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 10 aaacccgtagatccgaacttgtg 32
>27364_mdo-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>27501_age-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>27563_lla-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>27610_sla-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>27704_mml-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>28293_ggo-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>28414_hsa-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>30080_ppa-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>30198_ptr-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>30803_ppy-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>31471_oan-mir-100:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 13 aaacccgtagatccgaacttgtg 35
>31827_mmu-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>32708_rno-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>33187_bta-mir-100:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34
>33958_ssc-mir-100:mirbase
Length = 80
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 15 aaacccgtagatccgaacttgtg 37
>34263_dre-mir-100-1:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 23 aaacccgtagatccgaacttgtg 45
>34264_dre-mir-100-2:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 10 aaacccgtagatccgaacttgtg 32
>34579_fru-mir-100:mirbase
Length = 63
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 4 aaacccgtagatccgaacttgtg 26
>34726_tni-mir-100:mirbase
Length = 63
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 4 aaacccgtagatccgaacttgtg 26
>34970_isc-mir-100:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aacccgtagatccgatcttgtgt 33
||||||||||||||| |||||||
Sbjct: 21 aacccgtagatccgaacttgtgt 43
>35010_dpu-mir-100:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 11 aacccgtagatccgatcttgtgt 33
||||||||||||||| |||||||
Sbjct: 21 aacccgtagatccgaacttgtgt 43
>35288_aga-mir-100:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 10 aaacccgtagatccgatcttgtg 32
|||||||||||||||| ||||||
Sbjct: 14 aaacccgtagatccgaacttgtg 36
