miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25932_gga-mir-101-2:mirbase
Length = 76
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 67
Query: 61 aaggatggc 69
|||||||||
Sbjct: 68 aaggatggc 76
>27502_age-mir-101:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 6 tggctcagttatcacagtgctgatgctgtctattctaaaggtacagtactgtgataactg 65
Query: 61 aaggatggca 70
||||||||||
Sbjct: 66 aaggatggca 75
>28415_hsa-mir-101-1:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 6 tggctcagttatcacagtgctgatgctgtctattctaaaggtacagtactgtgataactg 65
Query: 61 aaggatggca 70
||||||||||
Sbjct: 66 aaggatggca 75
>30804_ppy-mir-101:mirbase
Length = 75
Score = 123 bits (62), Expect = 2e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 6 tggctcagttatcacagtgctgatgctgtctattctaaaggtacagtactgtgataactg 65
Query: 61 aaggatggca 70
||||||||||
Sbjct: 66 aaggatggca 75
>31472_oan-mir-101-1:mirbase
Length = 81
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 9 tggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactg 68
Query: 61 aaggatggcagc 72
||||||||||||
Sbjct: 69 aaggatggcagc 80
>31828_mmu-mir-101a:mirbase
Length = 83
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 10 tggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactg 69
Query: 61 aaggatggcagc 72
||||||||||||
Sbjct: 70 aaggatggcagc 81
>33189_bta-mir-101-1:mirbase
Length = 83
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 10 tggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactg 69
Query: 61 aaggatggcagc 72
||||||||||||
Sbjct: 70 aaggatggcagc 81
>33960_ssc-mir-101-2:mirbase
Length = 81
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 9 tggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactg 68
Query: 61 aaggatggcagc 72
||||||||||||
Sbjct: 69 aaggatggcagc 80
>27564_lla-mir-101:mirbase
Length = 75
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 6 tggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactg 65
Query: 61 aaggatggca 70
||||||||||
Sbjct: 66 aaggatggca 75
>27611_sla-mir-101:mirbase
Length = 75
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 6 tggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactg 65
Query: 61 aaggatggca 70
||||||||||
Sbjct: 66 aaggatggca 75
>27705_mml-mir-101-1:mirbase
Length = 75
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 6 tggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactg 65
Query: 61 aaggatggca 70
||||||||||
Sbjct: 66 aaggatggca 75
>28202_mne-mir-101:mirbase
Length = 75
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 6 tggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactg 65
Query: 61 aaggatggca 70
||||||||||
Sbjct: 66 aaggatggca 75
>28294_ggo-mir-101:mirbase
Length = 75
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 6 tggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactg 65
Query: 61 aaggatggca 70
||||||||||
Sbjct: 66 aaggatggca 75
>30081_ppa-mir-101:mirbase
Length = 75
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 6 tggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactg 65
Query: 61 aaggatggca 70
||||||||||
Sbjct: 66 aaggatggca 75
>30199_ptr-mir-101-1:mirbase
Length = 75
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 6 tggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactg 65
Query: 61 aaggatggca 70
||||||||||
Sbjct: 66 aaggatggca 75
>30805_ppy-mir-101-1:mirbase
Length = 75
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 6 tggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactg 65
Query: 61 aaggatggca 70
||||||||||
Sbjct: 66 aaggatggca 75
>32709_rno-mir-101a:mirbase
Length = 75
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 6 tggctcagttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactg 65
Query: 61 aaggatggca 70
||||||||||
Sbjct: 66 aaggatggca 75
>25757_xtr-mir-101a-2:mirbase
Length = 83
Score = 111 bits (56), Expect = 7e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 10 tggctcagttatcacagtgctgatgctgtctactctaaaggtacagtactgtgataactg 69
Query: 61 aaggatgg 68
||||||||
Sbjct: 70 aaggatgg 77
>27365_mdo-mir-101-1:mirbase
Length = 83
Score = 111 bits (56), Expect = 7e-26
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 1 tggctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactg 60
|||||||||||||||||||||||||||||| || | |||||||||||||||||||||||
Sbjct: 10 tggctcagttatcacagtgctgatgctgtccgttctcaaggtacagtactgtgataactg 69
Query: 61 aaggatggcagc 72
||||||||||||
Sbjct: 70 aaggatggcagc 81
>34265_dre-mir-101a:mirbase
Length = 81
Score = 97.6 bits (49), Expect = 1e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 5 tcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactgaagg 64
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 13 tcagttatcacagtgctgatgctgtccatcttaaaggtacagtactgtgataactgaagg 72
Query: 65 atggc 69
|||||
Sbjct: 73 atggc 77
>26998_eca-mir-101:mirbase
Length = 59
Score = 93.7 bits (47), Expect = 2e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 4 ctcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactgaa 62
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1 ctcagttatcacagtgctgatgctgtcagttctaaaggtacagtactgtgataactgaa 59
>26676_cfa-mir-101-1:mirbase
Length = 55
Score = 85.7 bits (43), Expect = 4e-18
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 7 agttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactga 61
|||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1 agttatcacagtgctgatgctgtccattctaaaggtacagtactgtgataactga 55
>34580_fru-mir-101a:mirbase
Length = 74
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 5 tcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactgaagg 64
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 10 tcagttatcacagtgctgatgctgtccccatcgaaggtacagtactgtgataactgaagg 69
Query: 65 atggc 69
|||||
Sbjct: 70 atggc 74
>34727_tni-mir-101a:mirbase
Length = 74
Score = 81.8 bits (41), Expect = 6e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 5 tcagttatcacagtgctgatgctgtctcttgtaaaggtacagtactgtgataactgaagg 64
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 10 tcagttatcacagtgctgatgctgtccccatcgaaggtacagtactgtgataactgaagg 69
Query: 65 atggc 69
|||||
Sbjct: 70 atggc 74
>25756_xtr-mir-101a-1:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactgaaggatgg 68
||||||||||||||||||||||||||| ||||
Sbjct: 50 aaaggtacagtactgtgataactgaagaatgg 81
>25931_gga-mir-101:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactgaaggatgg 68
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>26442_tgu-mir-101-1:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactgaaggatgg 68
||||||||||||||||||||||||||| ||||
Sbjct: 37 aaaggtacagtactgtgataactgaagaatgg 68
>26999_eca-mir-101-2:mirbase
Length = 72
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactgaaggatgg 68
||||||||||||||||||||||||||| ||||
Sbjct: 39 aaaggtacagtactgtgataactgaagaatgg 70
>27366_mdo-mir-101-2:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactgaaggatgg 68
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>27706_mml-mir-101-2:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactgaaggatgg 68
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>28416_hsa-mir-101-2:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactgaaggatgg 68
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>30200_ptr-mir-101-2:mirbase
Length = 78
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactgaaggatgg 68
||||||||||||||||||||||||||| ||||
Sbjct: 43 aaaggtacagtactgtgataactgaagaatgg 74
>30806_ppy-mir-101-2:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactgaaggatgg 68
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>31473_oan-mir-101-2:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactgaaggatgg 68
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>33188_bta-mir-101:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactgaaggatgg 68
||||||||||||||||||||||||||| ||||
Sbjct: 44 aaaggtacagtactgtgataactgaagaatgg 75
>33959_ssc-mir-101-1:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactgaaggatgg 68
||||||||||||||||||||||||||| ||||
Sbjct: 50 aaaggtacagtactgtgataactgaagaatgg 81
>26677_cfa-mir-101-2:mirbase
Length = 55
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactga 61
|||||||||||||||||||||||||
Sbjct: 31 aaaggtacagtactgtgataactga 55
>31829_mmu-mir-101b:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactgaaggatggc 69
|||||||||||||||||||| |||||| |||||
Sbjct: 56 aaaggtacagtactgtgatagctgaagaatggc 88
>32710_rno-mir-101b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 8e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 37 aaaggtacagtactgtgataactgaaggatgg 68
|||||||||||||||||||| |||||| ||||
Sbjct: 56 aaaggtacagtactgtgatagctgaagaatgg 87
>31830_mmu-mir-101c:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 43 acagtactgtgataactga 61
|||||||||||||||||||
Sbjct: 46 acagtactgtgataactga 64
>34266_dre-mir-101b:mirbase
Length = 112
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 41 gtacagtactgtgataactgaag 63
|||||||||| ||||||||||||
Sbjct: 63 gtacagtactatgataactgaag 85
>34581_fru-mir-101b:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 41 gtacagtactgtgataactgaag 63
|||||||||| ||||||||||||
Sbjct: 51 gtacagtactatgataactgaag 73
>34728_tni-mir-101b:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 41 gtacagtactgtgataactgaag 63
|||||||||| ||||||||||||
Sbjct: 51 gtacagtactatgataactgaag 73
