miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25946_gga-mir-128-2:mirbase
Length = 84
Score = 155 bits (78), Expect = 8e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 22 gctggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggt 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 gctggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggt 66
Query: 82 ctcttttcctgctgtgtc 99
||||||||||||||||||
Sbjct: 67 ctcttttcctgctgtgtc 84
>27378_mdo-mir-128:mirbase
Length = 84
Score = 129 bits (65), Expect = 5e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 25 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 84
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgttacactgtcagagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 85 ttttcctgctgtg 97
||| |||||||||
Sbjct: 70 tttccctgctgtg 82
>25769_xtr-mir-128-2:mirbase
Length = 80
Score = 121 bits (61), Expect = 1e-28
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 17 gtgcggctggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaa 76
|||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gtgcagctggaacgggggccgttacactgtaagagagtgagtagtaggtctcacagtgaa 60
Query: 77 ccggtctcttttc 89
|||||||||||||
Sbjct: 61 ccggtctcttttc 73
>27724_mml-mir-128b:mirbase
Length = 84
Score = 117 bits (59), Expect = 2e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 25 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 84
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 85 ttttcctgctgtgtc 99
||| ||| |||||||
Sbjct: 70 tttccctactgtgtc 84
>28438_hsa-mir-128-2:mirbase
Length = 84
Score = 117 bits (59), Expect = 2e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 25 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 84
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 85 ttttcctgctgtgtc 99
||| ||| |||||||
Sbjct: 70 tttccctactgtgtc 84
>30215_ptr-mir-128-2:mirbase
Length = 83
Score = 117 bits (59), Expect = 2e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 25 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 84
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 9 ggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccggtctc 68
Query: 85 ttttcctgctgtgtc 99
||| ||| |||||||
Sbjct: 69 tttccctactgtgtc 83
>30824_ppy-mir-128-2:mirbase
Length = 84
Score = 117 bits (59), Expect = 2e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 25 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 84
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 85 ttttcctgctgtgtc 99
||| ||| |||||||
Sbjct: 70 tttccctactgtgtc 84
>31483_oan-mir-128-2:mirbase
Length = 111
Score = 117 bits (59), Expect = 2e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 25 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 84
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 23 ggaaggggggccgttacactgtaagagagtgagtaccaggtctcacagtgaaccggtctc 82
Query: 85 ttt 87
|||
Sbjct: 83 ttt 85
>32728_rno-mir-128-2:mirbase
Length = 84
Score = 117 bits (59), Expect = 2e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 25 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 84
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 85 ttttcctgctgtgtc 99
||| ||| |||||||
Sbjct: 70 tttccctactgtgtc 84
>27016_eca-mir-128:mirbase
Length = 84
Score = 109 bits (55), Expect = 4e-25
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 25 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 84
||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgatgcactgtacgagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 85 ttttcctgctgtgtc 99
||| ||| |||||||
Sbjct: 70 tttccctactgtgtc 84
>31851_mmu-mir-128-2:mirbase
Length = 76
Score = 109 bits (55), Expect = 4e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 25 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 84
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 ggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 65
Query: 85 ttt 87
|||
Sbjct: 66 ttt 68
>26695_cfa-mir-128-2:mirbase
Length = 58
Score = 99.6 bits (50), Expect = 4e-22
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 30 gggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctcttt 87
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccggtctcttt 58
>33207_bta-mir-128-2:mirbase
Length = 84
Score = 93.7 bits (47), Expect = 3e-20
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 25 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 84
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 85 ttttcctgctgtgtc 99
||| ||| |||||||
Sbjct: 70 tttccctactgtgtc 84
>33976_ssc-mir-128-2:mirbase
Length = 80
Score = 91.7 bits (46), Expect = 1e-19
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 25 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 84
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 7 ggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaaccggtctc 66
Query: 85 ttttcctgctgtgt 98
||| ||| ||||||
Sbjct: 67 tttccctactgtgt 80
>34592_fru-mir-128-2:mirbase
Length = 72
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 63 ggtctcacagtgaaccggtctcttttcctgctg 95
|||||||||||||||||||||||||||||||||
Sbjct: 40 ggtctcacagtgaaccggtctcttttcctgctg 72
>34739_tni-mir-128-2:mirbase
Length = 72
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 63 ggtctcacagtgaaccggtctcttttcctgctg 95
|||||||||||||||||||||||||||||||||
Sbjct: 40 ggtctcacagtgaaccggtctcttttcctgctg 72
>34286_dre-mir-128-2:mirbase
Length = 123
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 64 gtctcacagtgaaccggtctcttttcctgct 94
|||||||||||||||||||||||||||||||
Sbjct: 66 gtctcacagtgaaccggtctcttttcctgct 96
>34591_fru-mir-128-1:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctcttttcc 90
||||||||||||||||||||||||||
Sbjct: 49 tctcacagtgaaccggtctcttttcc 74
>25476_pma-mir-128-1:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 64 gtctcacagtgaaccggtctcttttcctg 92
|||||||||||||||||||||||| ||||
Sbjct: 53 gtctcacagtgaaccggtctctttccctg 81
>31482_oan-mir-128-1:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 64 gtctcacagtgaaccggtctctttt 88
|||||||||||||||||||||||||
Sbjct: 41 gtctcacagtgaaccggtctctttt 65
>25477_pma-mir-128-2:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctcttttcctg 92
||||||||||||||||||||||| ||||
Sbjct: 54 tctcacagtgaaccggtctctttccctg 81
>25768_xtr-mir-128-1:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 49 tctcacagtgaaccggtctctttt 72
>25945_gga-mir-128-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>26456_tgu-mir-128-1:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 39 tctcacagtgaaccggtctctttt 62
>27017_eca-mir-128-2:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 42 tctcacagtgaaccggtctctttt 65
>27510_age-mir-128:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>27617_sla-mir-128:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>27723_mml-mir-128a:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>28437_hsa-mir-128-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>30089_ppa-mir-128:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>30214_ptr-mir-128-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>30823_ppy-mir-128:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>31850_mmu-mir-128-1:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 42 tctcacagtgaaccggtctctttt 65
>32727_rno-mir-128-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>33206_bta-mir-128-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>33975_ssc-mir-128-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctctttt 71
>34285_dre-mir-128-1:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 58 tctcacagtgaaccggtctctttt 81
>34738_tni-mir-128-1:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctctttt 88
||||||||||||||||||||||||
Sbjct: 44 tctcacagtgaaccggtctctttt 67
>26694_cfa-mir-128-1:mirbase
Length = 56
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 tctcacagtgaaccggtctcttt 87
|||||||||||||||||||||||
Sbjct: 34 tctcacagtgaaccggtctcttt 56
