miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25954_gga-mir-135a-1:mirbase
Length = 88
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 9 tgtatggctttttattcctatgtgattatacatcccacttcatatagggattgaagccgt 68
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 13 tgtatggctttttattcctatgtgattatacatcccgcttcatatagggattgaagccgt 72
Query: 69 gca 71
|||
Sbjct: 73 gca 75
>26705_cfa-mir-135a-1:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 6e-11
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgattatacatcccacttcatatagggattgaagccgtg 69
||||||||||||||||||||||||| ||| | ||| |||||||||||||| |||||||
Sbjct: 17 tatggctttttattcctatgtgattttactgctcac-tcatatagggattggagccgtg 74
>27029_eca-mir-135a:mirbase
Length = 60
Score = 61.9 bits (31), Expect = 6e-11
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgattatacatcccacttcatatagggattgaagccgtg 69
||||||||||||||||||||||||| ||| | ||| |||||||||||||| |||||||
Sbjct: 2 tatggctttttattcctatgtgattctactgctcac-tcatatagggattggagccgtg 59
>27512_age-mir-135-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 6e-11
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgattatacatcccacttcatatagggattgaagccgtg 69
||||||||||||||||||||||||| ||| | ||| |||||||||||||| |||||||
Sbjct: 17 tatggctttttattcctatgtgattctactgctcac-tcatatagggattggagccgtg 74
>27574_lla-mir-135-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 6e-11
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgattatacatcccacttcatatagggattgaagccgtg 69
||||||||||||||||||||||||| ||| | ||| |||||||||||||| |||||||
Sbjct: 17 tatggctttttattcctatgtgattctactgctcac-tcatatagggattggagccgtg 74
>27735_mml-mir-135a-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 6e-11
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgattatacatcccacttcatatagggattgaagccgtg 69
||||||||||||||||||||||||| ||| | ||| |||||||||||||| |||||||
Sbjct: 17 tatggctttttattcctatgtgattctactgctcac-tcatatagggattggagccgtg 74
>28449_hsa-mir-135a-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 6e-11
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgattatacatcccacttcatatagggattgaagccgtg 69
||||||||||||||||||||||||| ||| | ||| |||||||||||||| |||||||
Sbjct: 17 tatggctttttattcctatgtgattctactgctcac-tcatatagggattggagccgtg 74
>30093_ppa-mir-135-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 6e-11
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgattatacatcccacttcatatagggattgaagccgtg 69
||||||||||||||||||||||||| ||| | ||| |||||||||||||| |||||||
Sbjct: 17 tatggctttttattcctatgtgattctactgctcac-tcatatagggattggagccgtg 74
>30224_ptr-mir-135a-1:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 6e-11
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgattatacatcccacttcatatagggattgaagccgtg 69
||||||||||||||||||||||||| ||| | ||| |||||||||||||| |||||||
Sbjct: 17 tatggctttttattcctatgtgattctactgctcac-tcatatagggattggagccgtg 74
>30835_ppy-mir-135a-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 6e-11
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgattatacatcccacttcatatagggattgaagccgtg 69
||||||||||||||||||||||||| ||| | ||| |||||||||||||| |||||||
Sbjct: 17 tatggctttttattcctatgtgattctactgctcac-tcatatagggattggagccgtg 74
>33218_bta-mir-135a-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 6e-11
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgattatacatcccacttcatatagggattgaagccgtg 69
||||||||||||||||||||||||| ||| | ||| |||||||||||||| |||||||
Sbjct: 17 tatggctttttattcctatgtgattctactgctcac-tcatatagggattggagccgtg 74
>33986_ssc-mir-135-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 6e-11
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgattatacatcccacttcatatagggattgaagccgtg 69
||||||||||||||||||||||||| ||| | || ||||||||||||||| |||||||
Sbjct: 17 tatggctttttattcctatgtgattctactgctca-ttcatatagggattggagccgtg 74
>25487_pma-mir-135a:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||||||||||||||||||
Sbjct: 15 tatggctttttattcctatgtgatt 39
>25781_xtr-mir-135-2:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||||||||||||||||||
Sbjct: 16 tatggctttttattcctatgtgatt 40
>25956_gga-mir-135a-3:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||||||||||||||||||
Sbjct: 16 tatggctttttattcctatgtgatt 40
>26466_tgu-mir-135a-2:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||||||||||||||||||
Sbjct: 15 tatggctttttattcctatgtgatt 39
>31492_oan-mir-135b:mirbase
Length = 114
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||||||||||||||||||
Sbjct: 31 tatggctttttattcctatgtgatt 55
>31863_mmu-mir-135a-1:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||||||||||||||||||
Sbjct: 17 tatggctttttattcctatgtgatt 41
>25780_xtr-mir-135-1:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>25955_gga-mir-135a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>26465_tgu-mir-135a-1:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 11 tatggctttttattcctatgtgat 34
>26706_cfa-mir-135a-2:mirbase
Length = 62
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 2 tatggctttttattcctatgtgat 25
>26707_cfa-mir-135a-2:mirbase
Length = 62
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 2 tatggctttttattcctatgtgat 25
>27030_eca-mir-135a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>27383_mdo-mir-135a:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>27513_age-mir-135-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>27575_lla-mir-135-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>27736_mml-mir-135a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>28306_ggo-mir-135:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>28450_hsa-mir-135a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>30094_ppa-mir-135-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>30225_ptr-mir-135a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>30834_ppy-mir-135:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>31491_oan-mir-135a:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 29 tatggctttttattcctatgtgat 52
>31864_mmu-mir-135a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>32737_rno-mir-135a:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>33219_bta-mir-135a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>33987_ssc-mir-135-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgat 34
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>25488_pma-mir-135b:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 8 ttgtatggctttttattcctatgtgat 34
||||||||||||||||||||| |||||
Sbjct: 9 ttgtatggctttttattcctacgtgat 35
>34300_dre-mir-135a:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtga 33
|||||||||||||||||||||||
Sbjct: 16 tatggctttttattcctatgtga 38
>33220_bta-mir-135b:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatta 36
|||||||||| |||||||||||||||
Sbjct: 14 tatggcttttcattcctatgtgatta 39
>26708_cfa-mir-135b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||| ||||||||||||||
Sbjct: 15 tatggcttttcattcctatgtgatt 39
>27031_eca-mir-135b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||| ||||||||||||||
Sbjct: 15 tatggcttttcattcctatgtgatt 39
>27384_mdo-mir-135b:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||| ||||||||||||||
Sbjct: 18 tatggcttttcattcctatgtgatt 42
>27737_mml-mir-135b:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||| ||||||||||||||
Sbjct: 16 tatggcttttcattcctatgtgatt 40
>28451_hsa-mir-135b:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||| ||||||||||||||
Sbjct: 16 tatggcttttcattcctatgtgatt 40
>30226_ptr-mir-135b:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||| ||||||||||||||
Sbjct: 16 tatggcttttcattcctatgtgatt 40
>30836_ppy-mir-135b:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||| ||||||||||||||
Sbjct: 16 tatggcttttcattcctatgtgatt 40
>31865_mmu-mir-135b:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||| ||||||||||||||
Sbjct: 16 tatggcttttcattcctatgtgatt 40
>32738_rno-mir-135b:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
|||||||||| ||||||||||||||
Sbjct: 16 tatggcttttcattcctatgtgatt 40
>34302_dre-mir-135c-1:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 11 tatggctttctattcctatgtgatt 35
>34303_dre-mir-135c-2:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 11 tatggctttctattcctatgtgatt 35
>34304_dre-mir-135c-3:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 36 tatggctttctattcctatgtgatt 60
>34598_fru-mir-135a:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 11 tatggctttctattcctatgtgatt 35
>34599_fru-mir-135b:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtatggctttttattcctat 29
|||||||||||||||||||||
Sbjct: 14 tgtatggctttttattcctat 34
>34745_tni-mir-135a:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tatggctttttattcctatgtgatt 35
||||||||| |||||||||||||||
Sbjct: 11 tatggctttctattcctatgtgatt 35
>34746_tni-mir-135b:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 tgtatggctttttattcctat 29
|||||||||||||||||||||
Sbjct: 12 tgtatggctttttattcctat 32
>34301_dre-mir-135b:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 gtatggctttttattcctat 29
||||||||||||||||||||
Sbjct: 12 gtatggctttttattcctat 31
