miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31501_oan-mir-144:mirbase
Length = 135
Score = 105 bits (53), Expect = 4e-24
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 4 ggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtact 60
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 50 ggatatcatcgtatactgtaagtttgctatgagacactacagtatagatgatgtact 106
>25964_gga-mir-144:mirbase
Length = 85
Score = 97.6 bits (49), Expect = 9e-22
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 4 ggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtactccc 63
|||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 17 ggatatcatcatatactgtaagttcactatgagacactacagtatagatgatgtactccc 76
Query: 64 c 64
|
Sbjct: 77 c 77
>27392_mdo-mir-144:mirbase
Length = 85
Score = 97.6 bits (49), Expect = 9e-22
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 4 ggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtact 60
|||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 15 ggatatcatcgtatactgtaagtttgcaatgagacactacagtatagatgatgtact 71
>27044_eca-mir-144:mirbase
Length = 66
Score = 89.7 bits (45), Expect = 2e-19
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 4 ggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtact 60
|||||||||| ||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 6 ggatatcatcatatactgtaagtttgcgatgagacactacagtatagatgatgtact 62
>28464_hsa-mir-144:mirbase
Length = 86
Score = 89.7 bits (45), Expect = 2e-19
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 4 ggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtact 60
|||||||||| ||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 15 ggatatcatcatatactgtaagtttgcgatgagacactacagtatagatgatgtact 71
>30099_ppa-mir-144:mirbase
Length = 86
Score = 89.7 bits (45), Expect = 2e-19
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 4 ggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtact 60
|||||||||| ||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 15 ggatatcatcatatactgtaagtttgcgatgagacactacagtatagatgatgtact 71
>30236_ptr-mir-144:mirbase
Length = 86
Score = 89.7 bits (45), Expect = 2e-19
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 4 ggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtact 60
|||||||||| ||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 15 ggatatcatcatatactgtaagtttgcgatgagacactacagtatagatgatgtact 71
>30848_ppy-mir-144:mirbase
Length = 86
Score = 89.7 bits (45), Expect = 2e-19
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 4 ggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtact 60
|||||||||| ||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 15 ggatatcatcatatactgtaagtttgcgatgagacactacagtatagatgatgtact 71
>27749_mml-mir-144:mirbase
Length = 86
Score = 81.8 bits (41), Expect = 6e-17
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 4 ggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtact 60
|||||||||| ||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 15 ggatatcatcatatactgtaagtttgtgatgagacactacagtatagatgatgtact 71
>28215_mne-mir-144:mirbase
Length = 86
Score = 81.8 bits (41), Expect = 6e-17
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 4 ggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtact 60
|||||||||| ||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 15 ggatatcatcatatactgtaagtttgtgatgagacactacagtatagatgatgtact 71
>31877_mmu-mir-144:mirbase
Length = 66
Score = 81.8 bits (41), Expect = 6e-17
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 4 ggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtact 60
|||||||||| ||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 6 ggatatcatcatatactgtaagtttgtgatgagacactacagtatagatgatgtact 62
>32750_rno-mir-144:mirbase
Length = 83
Score = 81.8 bits (41), Expect = 6e-17
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 4 ggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtact 60
|||||||||| ||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 13 ggatatcatcatatactgtaagtttgtgatgagacactacagtatagatgatgtact 69
>33230_bta-mir-144:mirbase
Length = 84
Score = 81.8 bits (41), Expect = 6e-17
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 4 ggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtact 60
|||||||||| ||||||||||||| || | |||||||||||||||||||||||||||
Sbjct: 13 ggatatcatcatatactgtaagtttgcaacgagacactacagtatagatgatgtact 69
>34316_dre-mir-144:mirbase
Length = 89
Score = 79.8 bits (40), Expect = 2e-16
Identities = 56/60 (93%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 2 caggatatcatcgtatactgtaagttggctat-gagacactacagtatagatgatgtact 60
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 11 caggatatcatcgtatactgtaagttcattattgagacactacagtatagatgatgtact 70
>25793_xtr-mir-144:mirbase
Length = 62
Score = 73.8 bits (37), Expect = 1e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 4 ggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtact 60
|||||||||| ||||||||||||| | | | ||||||||||||||||||||||||||
Sbjct: 5 ggatatcatcatatactgtaagtttgttttaagacactacagtatagatgatgtact 61
>26718_cfa-mir-144:mirbase
Length = 60
Score = 67.9 bits (34), Expect = 8e-13
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3 aggatatcatcgtatactgtaagttggctatgagacactacagtatagatgatgtact 60
||||||||||| ||||||||||||| || | ||| ||||||||||||||||||||||
Sbjct: 1 aggatatcatcatatactgtaagtttgcgacaagatactacagtatagatgatgtact 58
>34605_fru-mir-144:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 3e-09
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 2 caggatatcatcgtatactgtaagttggctat-gagacactacagtatagatgatgtact 60
|||||||||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 7 caggatatcatctaatactgtaagtttattaaagagacactacagtatagatgatgtact 66
>34752_tni-mir-144:mirbase
Length = 74
Score = 56.0 bits (28), Expect = 3e-09
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 2 caggatatcatcgtatactgtaagttggctat-gagacactacagtatagatgatgtact 60
|||||||||||| ||||||||||||| || | |||||||||||||||||||||||||
Sbjct: 8 caggatatcatcttatactgtaagtttaataaagtgacactacagtatagatgatgtact 67
