miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41101_tcc-MIR168:mirbase
          Length = 167

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 145 ttgggtcctgccttgcatcaactgaattggagaccgctgtga 186
           |||| ||| |||||||||||||||||| ||||||||| ||||
Sbjct: 121 ttggatcccgccttgcatcaactgaatcggagaccgcggtga 162



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 18 ctcttattcgcttggtgcaggtcggga 44
          |||| ||||||||||||||||||||||
Sbjct: 14 ctctaattcgcttggtgcaggtcggga 40




>41348_ptc-MIR168b:mirbase
          Length = 136

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 18 ctcttattcgcttggtgcaggtcgggacctcattcg 53
          |||| |||||||||||||||||||||| || |||||
Sbjct: 4  ctctaattcgcttggtgcaggtcgggaactgattcg 39



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 145 ttgggtcctgccttgcatcaactgaattggaga 177
           |||| ||| |||||||||||||||||| |||||
Sbjct: 104 ttggatcccgccttgcatcaactgaatcggaga 136




>41347_ptc-MIR168a:mirbase
          Length = 160

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 18 ctcttattcgcttggtgcaggtcgggacctcattcg 53
          |||| |||||||||||||||||||||| || |||||
Sbjct: 4  ctctgattcgcttggtgcaggtcgggaactgattcg 39



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 145 ttgggtcctgccttgcatcaactgaattggag 176
           |||| ||| |||||||||||||||||| ||||
Sbjct: 128 ttggatcccgccttgcatcaactgaatcggag 159




>41215_crt-MIR168:mirbase
          Length = 201

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 145 ttgggtcctgccttgcatcaactgaattggagaccg 180
           |||| ||| |||||||||||||||||| ||||||||
Sbjct: 137 ttggatcccgccttgcatcaactgaatcggagaccg 172



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 18 ctcttattcgcttggtgcaggtcggga 44
          |||| ||||||||||||||||||||||
Sbjct: 14 ctctaattcgcttggtgcaggtcggga 40




>41210_ccl-MIR168:mirbase
          Length = 176

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 145 ttgggtcctgccttgcatcaactgaattggagaccg 180
           |||| ||| |||||||||||||||||| ||||||||
Sbjct: 136 ttggatcccgccttgcatcaactgaatcggagaccg 171



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 18 ctcttattcgcttggtgcaggtcggga 44
          |||| ||||||||||||||||||||||
Sbjct: 13 ctctaattcgcttggtgcaggtcggga 39




>41596_vvi-MIR168:mirbase
          Length = 132

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 18 ctcttattcgcttggtgcaggtcggga 44
          |||| ||||||||||||||||||||||
Sbjct: 4  ctctaattcgcttggtgcaggtcggga 30



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 154 gccttgcatcaactgaattggagac 178
           |||||||||||||||||| ||||||
Sbjct: 105 gccttgcatcaactgaatcggagac 129




>40448_gma-MIR168:mirbase
          Length = 125

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 18 ctcttattcgcttggtgcaggtcggga 44
          |||| ||||||||||||||||||||||
Sbjct: 12 ctctaattcgcttggtgcaggtcggga 38



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 145 ttgggtcctgccttgcatcaactgaattggagaccgctgtgaa 187
           |||| ||| |||||||||||||||||| |||| |||| |||||
Sbjct: 82  ttggatcccgccttgcatcaactgaatcggaggccgcggtgaa 124




>40355_rco-MIR168:mirbase
          Length = 131

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 23 attcgcttggtgcaggtcggga 44
          ||||||||||||||||||||||
Sbjct: 4  attcgcttggtgcaggtcggga 25




>40271_bna-MIR168:mirbase
          Length = 133

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 11 cggccgcctcttattcgcttggtgcaggtcggga 44
          |||| |||||| | ||||||||||||||||||||
Sbjct: 4  cggcggcctctgactcgcttggtgcaggtcggga 37




>40044_ath-MIR168b:mirbase
          Length = 124

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 23 attcgcttggtgcaggtcggga 44
          ||||||||||||||||||||||
Sbjct: 17 attcgcttggtgcaggtcggga 38




>40043_ath-MIR168a:mirbase
          Length = 138

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 23 attcgcttggtgcaggtcggga 44
          ||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcggga 37




>39833_aly-MIR168b:mirbase
          Length = 176

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 23 attcgcttggtgcaggtcggga 44
          ||||||||||||||||||||||
Sbjct: 41 attcgcttggtgcaggtcggga 62




>39832_aly-MIR168a:mirbase
          Length = 155

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 23 attcgcttggtgcaggtcggga 44
          ||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcggga 43