miRNEST 2.0, an integrative microRNA resource :: BLAST
>25976_gga-mir-181b-1:mirbase
Length = 89
Score = 139 bits (70), Expect = 3e-34
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 64
Query: 61 aatgaatgcaactg 74
||||||||||||||
Sbjct: 65 aatgaatgcaactg 78
>27404_mdo-mir-181b:mirbase
Length = 87
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 3 ggtcacaatcaacattcattgctgtcggtgggtttaactgtatggacaagctcactgaac 62
Query: 61 aatgaatgcaactg 74
||||||||||||||
Sbjct: 63 aatgaatgcaactg 76
>27579_lla-mir-181b:mirbase
Length = 110
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 26 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcactgaac 85
Query: 61 aatgaatgcaactg 74
||||||||||||||
Sbjct: 86 aatgaatgcaactg 99
>28315_ggo-mir-181b:mirbase
Length = 110
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 26 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcactgaac 85
Query: 61 aatgaatgcaactg 74
||||||||||||||
Sbjct: 86 aatgaatgcaactg 99
>28485_hsa-mir-181b-1:mirbase
Length = 110
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 26 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcactgaac 85
Query: 61 aatgaatgcaactg 74
||||||||||||||
Sbjct: 86 aatgaatgcaactg 99
>30104_ppa-mir-181b:mirbase
Length = 110
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 26 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcactgaac 85
Query: 61 aatgaatgcaactg 74
||||||||||||||
Sbjct: 86 aatgaatgcaactg 99
>30253_ptr-mir-181b-1:mirbase
Length = 108
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 26 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcactgaac 85
Query: 61 aatgaatgcaactg 74
||||||||||||||
Sbjct: 86 aatgaatgcaactg 99
>30867_ppy-mir-181b:mirbase
Length = 110
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 26 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcactgaac 85
Query: 61 aatgaatgcaactg 74
||||||||||||||
Sbjct: 86 aatgaatgcaactg 99
>27769_mml-mir-181b-1:mirbase
Length = 110
Score = 115 bits (58), Expect = 4e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 26 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactgaac 85
Query: 61 aatgaatgcaactg 74
||||||||||||||
Sbjct: 86 aatgaatgcaactg 99
>28223_mne-mir-181b:mirbase
Length = 110
Score = 115 bits (58), Expect = 4e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 26 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactgaac 85
Query: 61 aatgaatgcaactg 74
||||||||||||||
Sbjct: 86 aatgaatgcaactg 99
>31511_oan-mir-181b:mirbase
Length = 110
Score = 115 bits (58), Expect = 4e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
|||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 17 ggtcccaatgaacattcattgctgtcggtgggtttaactctgaggacaagctcactgaac 76
Query: 61 aatgaatgcaactg 74
|||||||| |||||
Sbjct: 77 aatgaatggaactg 90
>33246_bta-mir-181b-1:mirbase
Length = 110
Score = 115 bits (58), Expect = 4e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 26 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcactgaac 85
Query: 61 aatgaatgcaactg 74
||||| ||||||||
Sbjct: 86 aatgagtgcaactg 99
>34008_ssc-mir-181b-1:mirbase
Length = 80
Score = 115 bits (58), Expect = 4e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 1 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactgaac 60
Query: 61 aatgaatgcaactg 74
||||||||||||||
Sbjct: 61 aatgaatgcaactg 74
>26733_cfa-mir-181b-1:mirbase
Length = 62
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 11 aacattcattgctgtcggtgggtttaactatgtggacaagctcactgaacaatgaatgca 70
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggttgaactgtgtggacaagctcactgaacaatgaatgca 60
Query: 71 ac 72
||
Sbjct: 61 ac 62
>31894_mmu-mir-181b-1:mirbase
Length = 80
Score = 107 bits (54), Expect = 1e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| |||||||||||||||||||||||| |||| ||| || |||||||||||||
Sbjct: 2 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactgaac 61
Query: 61 aatgaatgcaactg 74
||||||||||||||
Sbjct: 62 aatgaatgcaactg 75
>32764_rno-mir-181b-1:mirbase
Length = 110
Score = 107 bits (54), Expect = 1e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| |||||||||||||||||||||||| |||| ||| || |||||||||||||
Sbjct: 26 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactgaac 85
Query: 61 aatgaatgcaactg 74
||||||||||||||
Sbjct: 86 aatgaatgcaactg 99
>34612_fru-mir-181b-1:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 3e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| ||||||||||||||||||||||||||||| | |||| ||||||||||||
Sbjct: 4 ggtcacaatcaacattcattgctgtcggtgggtttaactgtatggaagagctcactgaac 63
Query: 61 aatgaatgcaactg 74
|||||||||||||
Sbjct: 64 gatgaatgcaactg 77
>34759_tni-mir-181b-1:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 3e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| ||||||||||||||||||||||||||||| | |||| ||||||||||||
Sbjct: 4 ggtcacaatcaacattcattgctgtcggtgggtttaactgtatggaagagctcactgaac 63
Query: 61 aatgaatgcaactg 74
|||||||||||||
Sbjct: 64 gatgaatgcaactg 77
>25805_xtr-mir-181b-1:mirbase
Length = 83
Score = 67.9 bits (34), Expect = 9e-13
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
||||||||| |||||||||||||||||||||||| | || | |||||||| ||||||
Sbjct: 3 ggtcacaatcaacattcattgctgtcggtgggttgagttaagaacacaagctcgctgaac 62
Query: 61 aatgaatgcaactg 74
|||||||||||||
Sbjct: 63 gatgaatgcaactg 76
>34330_dre-mir-181b-1:mirbase
Length = 109
Score = 56.0 bits (28), Expect = 3e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggttta 36
||||| ||| ||||||||||||||||||||||||||
Sbjct: 27 ggtcataatcaacattcattgctgtcggtgggttta 62
>25977_gga-mir-181b-2:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 caatgaacattcattgctgtcggtgggttt 35
|||| |||||||||||||||||||||||||
Sbjct: 11 caatcaacattcattgctgtcggtgggttt 40
>26486_tgu-mir-181b-2:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 caatgaacattcattgctgtcggtgggttt 35
|||| |||||||||||||||||||||||||
Sbjct: 6 caatcaacattcattgctgtcggtgggttt 35
>27772_mml-mir-181d:mirbase
Length = 137
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtt 34
||||||||| ||||||||||| ||||||||||||
Sbjct: 26 ggtcacaatcaacattcattgttgtcggtgggtt 59
>28488_hsa-mir-181d:mirbase
Length = 137
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtt 34
||||||||| ||||||||||| ||||||||||||
Sbjct: 26 ggtcacaatcaacattcattgttgtcggtgggtt 59
>30256_ptr-mir-181d:mirbase
Length = 136
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtt 34
||||||||| ||||||||||| ||||||||||||
Sbjct: 25 ggtcacaatcaacattcattgttgtcggtgggtt 58
>30870_ppy-mir-181d:mirbase
Length = 136
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtt 34
||||||||| ||||||||||| ||||||||||||
Sbjct: 25 ggtcacaatcaacattcattgttgtcggtgggtt 58
>31895_mmu-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 5e-08
Identities = 53/61 (86%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 11 aacattcattgctgtcggtgggtttaactatgtggacaagctcactgaacaatgaatgca 70
||||||||||||||||||||||||| | |||| || | |||||||| |||||||||||
Sbjct: 16 aacattcattgctgtcggtgggtttga--atgtcaaccaactcactgatcaatgaatgca 73
Query: 71 a 71
|
Sbjct: 74 a 74
>32767_rno-mir-181d:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtt 34
||||||||| ||||||||||| ||||||||||||
Sbjct: 1 ggtcacaattaacattcattgttgtcggtgggtt 34
>33249_bta-mir-181d:mirbase
Length = 113
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 ggtcacaatgaacattcattgctgtcggtgggtt 34
||||||||| ||||||||||| ||||||||||||
Sbjct: 25 ggtcacaatcaacattcattgttgtcggtgggtt 58
>34331_dre-mir-181b-2:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 caatgaacattcattgctgtcggtgggttt 35
|||| |||||||||||||||||||||||||
Sbjct: 11 caataaacattcattgctgtcggtgggttt 40
>34613_fru-mir-181b-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 caatgaacattcattgctgtcggtgggttt 35
|||| |||||||||||||||||||||||||
Sbjct: 6 caataaacattcattgctgtcggtgggttt 35
>34760_tni-mir-181b-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 caatgaacattcattgctgtcggtgggttt 35
|||| |||||||||||||||||||||||||
Sbjct: 6 caataaacattcattgctgtcggtgggttt 35
>25806_xtr-mir-181b-2:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 6 caatgaacattcattgctgtcggtgggtt 34
|||| ||||||||||||||||||||||||
Sbjct: 9 caataaacattcattgctgtcggtgggtt 37
>26734_cfa-mir-181b-2:mirbase
Length = 60
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 aacattcattgctgtcggtgggttt 35
|||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggttt 25
>27062_eca-mir-181b:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 aacattcattgctgtcggtgggttt 35
|||||||||||||||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggttt 40
>27770_mml-mir-181b-2:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 aacattcattgctgtcggtgggttt 35
|||||||||||||||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggttt 40
>28486_hsa-mir-181b-2:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 aacattcattgctgtcggtgggttt 35
|||||||||||||||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggttt 40
>30254_ptr-mir-181b-2:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 aacattcattgctgtcggtgggttt 35
|||||||||||||||||||||||||
Sbjct: 15 aacattcattgctgtcggtgggttt 39
>30868_ppy-mir-181b-2:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 aacattcattgctgtcggtgggttt 35
|||||||||||||||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggttt 40
>31512_oan-mir-181c:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 2 gtcacaatgaacattcattgctgtcggtgggtt 34
|||||||| |||||||||| |||||||||||||
Sbjct: 10 gtcacaatcaacattcattactgtcggtgggtt 42
>32765_rno-mir-181b-2:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 aacattcattgctgtcggtgggttt 35
|||||||||||||||||||||||||
Sbjct: 15 aacattcattgctgtcggtgggttt 39
>33247_bta-mir-181b-2:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 aacattcattgctgtcggtgggttt 35
|||||||||||||||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggttt 40
>34009_ssc-mir-181b-2:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 aacattcattgctgtcggtgggttt 35
|||||||||||||||||||||||||
Sbjct: 13 aacattcattgctgtcggtgggttt 37
>34011_ssc-mir-181d:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 8e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 3 tcacaatgaacattcattgctgtcggtgggtt 34
||||||| ||||||||||| ||||||||||||
Sbjct: 1 tcacaatcaacattcattgttgtcggtgggtt 32
>34012_ssc-mir-181d:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 8e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 3 tcacaatgaacattcattgctgtcggtgggtt 34
||||||| ||||||||||| ||||||||||||
Sbjct: 1 tcacaatcaacattcattgttgtcggtgggtt 32
>34332_dre-mir-181c:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 acattcattgctgtcggtgggttt 35
||||||||||||||||||||||||
Sbjct: 13 acattcattgctgtcggtgggttt 36
>31897_mmu-mir-181d:mirbase
Length = 72
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 5 acaatgaacattcattgctgtcggtgggtt 34
||||| ||||||||||| ||||||||||||
Sbjct: 1 acaattaacattcattgttgtcggtgggtt 30
>26736_cfa-mir-181d:mirbase
Length = 64
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 aacattcattgctgtcggtgggtt 34
||||||||||| ||||||||||||
Sbjct: 1 aacattcattgttgtcggtgggtt 24
