miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25988_gga-mir-199-1:mirbase
Length = 94
Score = 141 bits (71), Expect = 7e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 gcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 gcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 73
Query: 61 taggctgtgct 71
|||||||||||
Sbjct: 74 taggctgtgct 84
>26494_tgu-mir-199-1:mirbase
Length = 71
Score = 141 bits (71), Expect = 7e-35
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 gcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 60
Query: 61 taggctgtgct 71
|||||||||||
Sbjct: 61 taggctgtgct 71
>31922_mmu-mir-199b:mirbase
Length = 110
Score = 99.6 bits (50), Expect = 2e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
||||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 26 cccagtgtttagactacctgttcaggactcccaaattgtacagtagtctgcacattggtt 85
Query: 62 aggctg 67
||||||
Sbjct: 86 aggctg 91
>34353_dre-mir-199-2:mirbase
Length = 96
Score = 93.7 bits (47), Expect = 2e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 gcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 60
|||||||||||||||||||||||||||| | | | ||||||||||||||||||||||||
Sbjct: 29 gcccagtgttcagactacctgttcaggaattagtgtttgtacagtagtctgcacattggt 88
Query: 61 taggctg 67
|||||||
Sbjct: 89 taggctg 95
>27417_mdo-mir-199b:mirbase
Length = 89
Score = 91.7 bits (46), Expect = 6e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
||||||||| |||||| |||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 15 cccagtgtttagactatctgttcaggactccaatattgtacagtagtctgcacattggtt 74
Query: 62 aggctg 67
||||||
Sbjct: 75 aggctg 80
>28516_hsa-mir-199b:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 6e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
||||||||| |||||| |||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 26 cccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcacattggtt 85
Query: 62 aggctg 67
||||||
Sbjct: 86 aggctg 91
>28517_hsa-mir-199b:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 6e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
||||||||| |||||| |||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 26 cccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcacattggtt 85
Query: 62 aggctg 67
||||||
Sbjct: 86 aggctg 91
>30278_ptr-mir-199b:mirbase
Length = 109
Score = 91.7 bits (46), Expect = 6e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
||||||||| |||||| |||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 26 cccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcacattggtt 85
Query: 62 aggctg 67
||||||
Sbjct: 86 aggctg 91
>33276_bta-mir-199b:mirbase
Length = 100
Score = 91.7 bits (46), Expect = 6e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
||||||||| |||||| |||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 16 cccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcacattggtt 75
Query: 62 aggctg 67
||||||
Sbjct: 76 aggctg 81
>33794_bta-mir-3604-2:mirbase
Length = 73
Score = 91.7 bits (46), Expect = 6e-20
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
||||||||| |||||| |||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 66 cccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcacattggtt 7
Query: 62 aggctg 67
||||||
Sbjct: 6 aggctg 1
>34032_ssc-mir-199b:mirbase
Length = 74
Score = 91.7 bits (46), Expect = 6e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
||||||||| |||||| |||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 8 cccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcacattggtt 67
Query: 62 aggctg 67
||||||
Sbjct: 68 aggctg 73
>27085_eca-mir-199b:mirbase
Length = 69
Score = 87.7 bits (44), Expect = 9e-19
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
||||||||| |||||| |||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 6 cccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcacattggtt 65
Query: 62 aggc 65
||||
Sbjct: 66 aggc 69
>27086_eca-mir-199b:mirbase
Length = 69
Score = 87.7 bits (44), Expect = 9e-19
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
||||||||| |||||| |||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 6 cccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcacattggtt 65
Query: 62 aggc 65
||||
Sbjct: 66 aggc 69
>34626_fru-mir-199-2:mirbase
Length = 73
Score = 85.7 bits (43), Expect = 4e-18
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1 gcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 60
|||||||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 7 gcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggt 66
Query: 61 taggctg 67
|||||||
Sbjct: 67 taggctg 73
>34773_tni-mir-199-2:mirbase
Length = 73
Score = 85.7 bits (43), Expect = 4e-18
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1 gcccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 60
|||||||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 7 gcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacattggt 66
Query: 61 taggctg 67
|||||||
Sbjct: 67 taggctg 73
>25818_xtr-mir-199a:mirbase
Length = 96
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 19 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 78
Query: 62 ag 63
||
Sbjct: 79 ag 80
>25989_gga-mir-199-2:mirbase
Length = 108
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 29 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 88
Query: 62 ag 63
||
Sbjct: 89 ag 90
>26496_tgu-mir-199-2:mirbase
Length = 128
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 26 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 85
Query: 62 ag 63
||
Sbjct: 86 ag 87
>26497_tgu-mir-199-2:mirbase
Length = 128
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 26 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 85
Query: 62 ag 63
||
Sbjct: 86 ag 87
>27582_lla-mir-199a:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>27623_sla-mir-199a:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>27795_mml-mir-199a-1:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>28231_mne-mir-199a:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>28326_ggo-mir-199a:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>28514_hsa-mir-199a-2:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>28515_hsa-mir-199a-2:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>30115_ppa-mir-199a:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>30277_ptr-mir-199a-2:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>30892_ppy-mir-199a:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>30893_ppy-mir-199a-2:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>30894_ppy-mir-199a-2:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>31527_oan-mir-199:mirbase
Length = 118
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>31920_mmu-mir-199a-2:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>31921_mmu-mir-199a-2:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>32786_rno-mir-199a:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>32787_rno-mir-199a:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>33272_bta-mir-199a-1:mirbase
Length = 104
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>33273_bta-mir-199a-1:mirbase
Length = 104
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 62 ag 63
||
Sbjct: 91 ag 92
>34029_ssc-mir-199a-1:mirbase
Length = 76
Score = 83.8 bits (42), Expect = 1e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 9 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 68
Query: 62 ag 63
||
Sbjct: 69 ag 70
>26757_cfa-mir-199-2:mirbase
Length = 59
Score = 77.8 bits (39), Expect = 9e-16
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 3 ccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 59
>26758_cfa-mir-199-3:mirbase
Length = 59
Score = 77.8 bits (39), Expect = 9e-16
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 3 ccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
|||||||| |||||| |||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 1 ccagtgtttagactatctgttcaggactcccaaattgtacagtagtctgcacattggtt 59
>27083_eca-mir-199a:mirbase
Length = 61
Score = 77.8 bits (39), Expect = 9e-16
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 60
|||||||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggt 59
>27084_eca-mir-199a:mirbase
Length = 61
Score = 77.8 bits (39), Expect = 9e-16
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggt 60
|||||||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggt 59
>30895_ppy-mir-199b:mirbase
Length = 111
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 6 gtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggttaggc 65
||||| |||||| |||||||||||| | | ||||||||||| ||||||||||||||||||
Sbjct: 31 gtgtttagactatctgttcaggactcccaaattgtacagtattctgcacattggttaggc 90
Query: 66 tg 67
||
Sbjct: 91 tg 92
>30896_ppy-mir-199b:mirbase
Length = 111
Score = 75.8 bits (38), Expect = 4e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 6 gtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggttaggc 65
||||| |||||| |||||||||||| | | ||||||||||| ||||||||||||||||||
Sbjct: 31 gtgtttagactatctgttcaggactcccaaattgtacagtattctgcacattggttaggc 90
Query: 66 tg 67
||
Sbjct: 91 tg 92
>31918_mmu-mir-199a-1:mirbase
Length = 70
Score = 69.9 bits (35), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 59
||||||||||||||||||||||||||| || || || |||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctgggacat-gtacagtagtctgcacattgg 64
Query: 60 ttaggc 65
||||||
Sbjct: 65 ttaggc 70
>31919_mmu-mir-199a-1:mirbase
Length = 70
Score = 69.9 bits (35), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 59
||||||||||||||||||||||||||| || || || |||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctgggacat-gtacagtagtctgcacattgg 64
Query: 60 ttaggc 65
||||||
Sbjct: 65 ttaggc 70
>25517_pma-mir-199a:mirbase
Length = 79
Score = 67.9 bits (34), Expect = 9e-13
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 11 cccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggtt 70
Query: 62 ag 63
||
Sbjct: 71 ag 72
>33793_bta-mir-3604-1:mirbase
Length = 78
Score = 65.9 bits (33), Expect = 3e-12
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 2 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 59
|||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 70 cccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcacattgg 11
Query: 60 ttaggctg 67
||||||||
Sbjct: 10 ttaggctg 3
>34030_ssc-mir-199a-2:mirbase
Length = 80
Score = 65.9 bits (33), Expect = 3e-12
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 59
|||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 10 cccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcacattgg 69
Query: 60 ttaggctg 67
||||||||
Sbjct: 70 ttaggctg 77
>34031_ssc-mir-199a-2:mirbase
Length = 80
Score = 65.9 bits (33), Expect = 3e-12
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 59
|||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 10 cccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcacattgg 69
Query: 60 ttaggctg 67
||||||||
Sbjct: 70 ttaggctg 77
>34352_dre-mir-199-1:mirbase
Length = 87
Score = 65.9 bits (33), Expect = 3e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcaggatcatactggtgtacagtagtctgcacattggtt 74
Query: 62 aggctgtgc 70
|| ||||||
Sbjct: 75 agactgtgc 83
>27796_mml-mir-199a-2:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 5e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 59
||||||||||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattgg 65
Query: 60 ttaggc 65
||||||
Sbjct: 66 ttaggc 71
>27797_mml-mir-199a-2:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 5e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 59
||||||||||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattgg 65
Query: 60 ttaggc 65
||||||
Sbjct: 66 ttaggc 71
>28512_hsa-mir-199a-1:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 5e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 59
||||||||||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatgtgtacagtagtctgcacattgg 65
Query: 60 ttaggc 65
||||||
Sbjct: 66 ttaggc 71
>28513_hsa-mir-199a-1:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 5e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 59
||||||||||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatgtgtacagtagtctgcacattgg 65
Query: 60 ttaggc 65
||||||
Sbjct: 66 ttaggc 71
>33274_bta-mir-199a-2:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 5e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 59
|||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcacattgg 65
Query: 60 ttaggc 65
||||||
Sbjct: 66 ttaggc 71
>33275_bta-mir-199a-2:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 5e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 59
|||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcacattgg 65
Query: 60 ttaggc 65
||||||
Sbjct: 66 ttaggc 71
>30276_ptr-mir-199a-1:mirbase
Length = 70
Score = 60.0 bits (30), Expect = 2e-10
Identities = 57/65 (87%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcagga--ctacgagattgtacagtagtctgcacattgg 59
||||||||||||||||||||||||||| || | ||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatgtgtacagtagtctgcacattgg 65
Query: 60 ttagg 64
|||||
Sbjct: 66 ttagg 70
>34625_fru-mir-199-1:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 2e-10
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttcaggactacgagattgtacagtagtctgcacattggtt 61
||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcaggattttactggtgtacagtagtctgcacattggtt 74
Query: 62 ag 63
||
Sbjct: 75 ag 76
>25518_pma-mir-199b:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 38 tgtacagtagtctgcacattggttag 63
||||||||||||||||||||||||||
Sbjct: 48 tgtacagtagtctgcacattggttag 73
>26756_cfa-mir-199-1:mirbase
Length = 61
Score = 52.0 bits (26), Expect = 5e-08
Identities = 53/61 (86%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 3 ccagtgttcagactacctgttca--ggactacgagattgtacagtagtctgcacattggt 60
||||||||||||||||||||||| || || || |||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttcagggggctctgaatgtgtacagtagtctgcacattggt 60
Query: 61 t 61
|
Sbjct: 61 t 61
>34772_tni-mir-199-1:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 38 tgtacagtagtctgcacattggttag 63
||||||||||||||||||||||||||
Sbjct: 50 tgtacagtagtctgcacattggttag 75
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttca 25
||||||||||||||||||||||||
Sbjct: 14 cccagtgttcagactacctgttca 37
>34354_dre-mir-199-3:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gcccagtgttcagactacctgttca 25
|||||||||||||||||||||||||
Sbjct: 15 gcccagtgttcagactacctgttca 39
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 41 acagtagtctgcacattggttaggctg 67
||||||||| |||||||||||||||||
Sbjct: 55 acagtagtccgcacattggttaggctg 81
>34627_fru-mir-199-3:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gcccagtgttcagactacctgttca 25
|||||||||||||||||||||||||
Sbjct: 16 gcccagtgttcagactacctgttca 40
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 41 acagtagtctgcacattggttaggctg 67
|||||||||||||||||||||| ||||
Sbjct: 56 acagtagtctgcacattggttaagctg 82
>34774_tni-mir-199-3:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gcccagtgttcagactacctgttca 25
|||||||||||||||||||||||||
Sbjct: 14 gcccagtgttcagactacctgttca 38
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 41 acagtagtctgcacattggtta 62
||||||||||||||||||||||
Sbjct: 54 acagtagtctgcacattggtta 75
>33277_bta-mir-199c:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 38 tgtacagtagtctgcacattgg 59
||||||||||||||||||||||
Sbjct: 44 tgtacagtagtctgcacattgg 65
>24847_cin-mir-199:mirbase
Length = 102
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 41 acagtagtctgcacattgg 59
|||||||||||||||||||
Sbjct: 66 acagtagtctgcacattgg 84
>25819_xtr-mir-199b:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 cccagtgttcagactacctgttc 24
||||||||||||||||| |||||
Sbjct: 31 cccagtgttcagactacgtgttc 53
