miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25998_gga-mir-205b:mirbase
Length = 98
Score = 105 bits (53), Expect = 5e-24
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 1 gccttcctggtgcccttcattccaccggaatctgtcgatgcagaacccggatttcagtga 60
||||||||| |||||||||||||||||||||||||| ||||||| || |||||||||||
Sbjct: 14 gccttcctgatgcccttcattccaccggaatctgtcagtgcagaaaccagatttcagtga 73
Query: 61 aatgaagcccctcagaaaggc 81
|||||||||| ||||| ||||
Sbjct: 74 aatgaagcccatcagagaggc 94
>25524_pma-mir-205b:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tgcccttcattccaccggaatctgt 35
||||||||||||||||||| |||||
Sbjct: 5 tgcccttcattccaccggagtctgt 29
>25668_xla-mir-205:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 5 tcctggtgcccttcattccaccggaatctgtc 36
||||| || |||||||||||||||| ||||||
Sbjct: 8 tcctgctgtccttcattccaccggagtctgtc 39
>25827_xtr-mir-205a:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 5 tcctggtgcccttcattccaccggaatctgtc 36
||||| || |||||||||||||||| ||||||
Sbjct: 8 tcctgctgtccttcattccaccggagtctgtc 39
>25523_pma-mir-205a:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 11 ccttcattccaccggagtctgtc 33
>25997_gga-mir-205a:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 23 ccttcattccaccggagtctgtc 45
>26765_cfa-mir-205:mirbase
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 8 ccttcattccaccggagtctgtc 30
>27091_eca-mir-205:mirbase
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 8 ccttcattccaccggagtctgtc 30
>27423_mdo-mir-205a:mirbase
Length = 72
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 6 ccttcattccaccggagtctgtc 28
>27518_age-mir-205:mirbase
Length = 109
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 35 ccttcattccaccggagtctgtc 57
>27583_lla-mir-205:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 35 ccttcattccaccggagtctgtc 57
>27802_mml-mir-205:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 35 ccttcattccaccggagtctgtc 57
>28233_mne-mir-205:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 35 ccttcattccaccggagtctgtc 57
>28329_ggo-mir-205:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 35 ccttcattccaccggagtctgtc 57
>28524_hsa-mir-205:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 35 ccttcattccaccggagtctgtc 57
>30117_ppa-mir-205:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 35 ccttcattccaccggagtctgtc 57
>30283_ptr-mir-205:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 35 ccttcattccaccggagtctgtc 57
>30901_ppy-mir-205:mirbase
Length = 109
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 35 ccttcattccaccggagtctgtc 57
>31931_mmu-mir-205:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 8 ccttcattccaccggagtctgtc 30
>32795_rno-mir-205:mirbase
Length = 108
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 34 ccttcattccaccggagtctgtc 56
>33283_bta-mir-205:mirbase
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 8 ccttcattccaccggagtctgtc 30
>34035_ssc-mir-205:mirbase
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 ccttcattccaccggaatctgtc 36
|||||||||||||||| ||||||
Sbjct: 8 ccttcattccaccggagtctgtc 30
