miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26002_gga-mir-215:mirbase
Length = 105
Score = 77.8 bits (39), Expect = 9e-16
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 1 gtccaggaaaatgacctatgaattgacagactgtcttttgcatttgcctgtcacttctat 60
||||||||||||||||||||||||||||||||| || || ||||||||| ||||||
Sbjct: 16 gtccaggaaaatgacctatgaattgacagactgctttcaaaatgtgcctgtcatttctat 75
Query: 61 aggccaatatt 71
|||||||||||
Sbjct: 76 aggccaatatt 86
>27098_eca-mir-215:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 4 caggaaaatgacctatgaattgacagac 31
||||||||||||||||||||||||||||
Sbjct: 20 caggaaaatgacctatgaattgacagac 47
>27810_mml-mir-215:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 4 caggaaaatgacctatgaattgacagac 31
||||||||||||||||||||||||||||
Sbjct: 20 caggaaaatgacctatgaattgacagac 47
>28237_mne-mir-215:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 4 caggaaaatgacctatgaattgacagac 31
||||||||||||||||||||||||||||
Sbjct: 20 caggaaaatgacctatgaattgacagac 47
>28532_hsa-mir-215:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 4 caggaaaatgacctatgaattgacagac 31
||||||||||||||||||||||||||||
Sbjct: 20 caggaaaatgacctatgaattgacagac 47
>30908_ppy-mir-215:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 4 caggaaaatgacctatgaattgacagac 31
||||||||||||||||||||||||||||
Sbjct: 20 caggaaaatgacctatgaattgacagac 47
>31535_oan-mir-215:mirbase
Length = 118
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 4 caggaaaatgacctatgaattgacagac 31
||||||||||||||||||||||||||||
Sbjct: 23 caggaaaatgacctatgaattgacagac 50
>33291_bta-mir-215:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 4 caggaaaatgacctatgaattgacagac 31
||||||||||||||||||||||||||||
Sbjct: 5 caggaaaatgacctatgaattgacagac 32
>34040_ssc-mir-215:mirbase
Length = 96
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 4 caggaaaatgacctatgaattgacagac 31
||||||||||||||||||||||||||||
Sbjct: 13 caggaaaatgacctatgaattgacagac 40
>27429_mdo-mir-215:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 5 aggaaaatgacctatgaattgacagac 31
|||||||||||||||||||||||||||
Sbjct: 17 aggaaaatgacctatgaattgacagac 43
>28331_ggo-mir-215:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 6 ggaaaatgacctatgaattgacagac 31
||||||||||||||||||||||||||
Sbjct: 22 ggaaaatgacctatgaattgacagac 47
>30290_ptr-mir-215:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 6 ggaaaatgacctatgaattgacagac 31
||||||||||||||||||||||||||
Sbjct: 22 ggaaaatgacctatgaattgacagac 47
>26774_cfa-mir-215:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 4 caggaaaatgacctatgaattgacagac 31
||||||||||||||| ||||||| ||||
Sbjct: 5 caggaaaatgacctacgaattgatagac 32
>31942_mmu-mir-215:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 4 caggaaaatgacctatgaattgacagac 31
||||| |||||||||||| |||||||||
Sbjct: 23 caggagaatgacctatgatttgacagac 50
>32805_rno-mir-215:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 4 caggaaaatgacctatgaattgacagac 31
||||| |||||||||||| |||||||||
Sbjct: 7 caggacaatgacctatgatttgacagac 34
>25812_xtr-mir-192:mirbase
Length = 87
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 11 atgacctatgaattgacag 29
|||||||||||||||||||
Sbjct: 15 atgacctatgaattgacag 33
>34340_dre-mir-192:mirbase
Length = 85
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 11 atgacctatgaattgacag 29
|||||||||||||||||||
Sbjct: 16 atgacctatgaattgacag 34
>34619_fru-mir-192:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 11 atgacctatgaattgacag 29
|||||||||||||||||||
Sbjct: 15 atgacctatgaattgacag 33
>34766_tni-mir-192:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 11 atgacctatgaattgacag 29
|||||||||||||||||||
Sbjct: 10 atgacctatgaattgacag 28
