miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26021_gga-mir-365-1:mirbase
Length = 85
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 73
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 74 attgctcttgca 85
>27445_mdo-mir-365:mirbase
Length = 87
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 74
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 75 attgctcttgca 86
>26814_cfa-mir-365-1:mirbase
Length = 87
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 16 agggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaaatcctt 75
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 76 attgctcttgca 87
>27147_eca-mir-365-2:mirbase
Length = 87
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 16 agggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaaatcctt 75
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 76 attgctcttgca 87
>27864_mml-mir-365-1:mirbase
Length = 87
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 16 agggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaaatcctt 75
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 76 attgctcttgca 87
>28601_hsa-mir-365-1:mirbase
Length = 87
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 16 agggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaaatcctt 75
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 76 attgctcttgca 87
>30342_ptr-mir-365-1:mirbase
Length = 86
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 15 agggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaaatcctt 74
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 75 attgctcttgca 86
>30968_ppy-mir-365-1:mirbase
Length = 87
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 16 agggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaaatcctt 75
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 76 attgctcttgca 87
>31549_oan-mir-365:mirbase
Length = 83
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 13 agggacttttgggggcagatgtgtttccattgcactatcataatgcccctaaaaatcctt 72
Query: 61 attgctcttgc 71
|||||||||||
Sbjct: 73 attgctcttgc 83
>32036_mmu-mir-365-1:mirbase
Length = 87
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 16 agggacttttgggggcagatgtgtttccattccgctatcataatgcccctaaaaatcctt 75
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 76 attgctcttgca 87
>33338_bta-mir-365:mirbase
Length = 87
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 16 agggacttttgggggcagatgtgtttgcattccactatcataatgcccctaaaaatcctt 75
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 76 attgctcttgca 87
>33339_bta-mir-365:mirbase
Length = 87
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 16 agggacttttgggggcagatgtgtttgcattccactatcataatgcccctaaaaatcctt 75
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 76 attgctcttgca 87
>34072_ssc-mir-365-1:mirbase
Length = 80
Score = 125 bits (63), Expect = 4e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 14 agggacttttgggggcagatgtgtttccattccactatcataatgcccctaaaaatcctt 73
Query: 61 attgctc 67
|||||||
Sbjct: 74 attgctc 80
>25851_xtr-mir-365-1:mirbase
Length = 86
Score = 111 bits (56), Expect = 7e-26
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 15 agggacttttgggggcagatgtgtttcacttacactaccataatgcccctaaaaatcctt 74
Query: 61 attgctcttgca 72
|||| |||||||
Sbjct: 75 attgttcttgca 86
>34394_dre-mir-365-1:mirbase
Length = 89
Score = 87.7 bits (44), Expect = 9e-19
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
|||| |||||||||||| |||||||| || ||| ||||||||||||||||||||||||
Sbjct: 15 aggggcttttgggggcacttgtgtttcagtttcaccatcataatgcccctaaaaatcctt 74
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 75 attgctcttgca 86
>34395_dre-mir-365-2:mirbase
Length = 98
Score = 71.9 bits (36), Expect = 6e-14
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
|||||||||| ||||||| ||||||| | || | |||||||||||||||||||||||
Sbjct: 18 agggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaaatcctt 77
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 78 attgctcttgca 89
>34650_fru-mir-365:mirbase
Length = 95
Score = 71.9 bits (36), Expect = 6e-14
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
|||||||||| ||||||| ||||||| | || | |||||||||||||||||||||||
Sbjct: 15 agggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaaatcctt 74
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 75 attgctcttgca 86
>34798_tni-mir-365:mirbase
Length = 92
Score = 71.9 bits (36), Expect = 6e-14
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
|||||||||| ||||||| ||||||| | || | |||||||||||||||||||||||
Sbjct: 15 agggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaaatcctt 74
Query: 61 attgctcttgca 72
||||||||||||
Sbjct: 75 attgctcttgca 86
>34396_dre-mir-365-3:mirbase
Length = 99
Score = 69.9 bits (35), Expect = 2e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 38 tcataatgcccctaaaaatccttattgctcttgca 72
|||||||||||||||||||||||||||||||||||
Sbjct: 56 tcataatgcccctaaaaatccttattgctcttgca 90
>34397_dre-mir-365-4:mirbase
Length = 99
Score = 69.9 bits (35), Expect = 2e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 38 tcataatgcccctaaaaatccttattgctcttgca 72
|||||||||||||||||||||||||||||||||||
Sbjct: 56 tcataatgcccctaaaaatccttattgctcttgca 90
>32037_mmu-mir-365-2:mirbase
Length = 112
Score = 63.9 bits (32), Expect = 1e-11
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
||||||||| ||||||| ||||||||| | || | |||||||||||||||||||||||
Sbjct: 29 agggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaaatcctt 87
Query: 61 attgctcttgca 72
|||| |||||||
Sbjct: 88 attgttcttgca 99
>32883_rno-mir-365:mirbase
Length = 86
Score = 63.9 bits (32), Expect = 1e-11
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
||||||||| ||||||| ||||||||| | || | |||||||||||||||||||||||
Sbjct: 16 agggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaaatcctt 74
Query: 61 attgctcttgca 72
|||| |||||||
Sbjct: 75 attgttcttgca 86
>26022_gga-mir-365-2:mirbase
Length = 96
Score = 61.9 bits (31), Expect = 5e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 38 tcataatgcccctaaaaatccttattgctcttgca 72
||||||||||||||||||||||||||| |||||||
Sbjct: 54 tcataatgcccctaaaaatccttattgttcttgca 88
>26527_tgu-mir-365-2:mirbase
Length = 112
Score = 61.9 bits (31), Expect = 5e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 38 tcataatgcccctaaaaatccttattgctcttgca 72
||||||||||||||||||||||||||| |||||||
Sbjct: 78 tcataatgcccctaaaaatccttattgttcttgca 112
>26815_cfa-mir-365-2:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 5e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 38 tcataatgcccctaaaaatccttattgctcttgca 72
||||||||||||||||||||||||||| |||||||
Sbjct: 65 tcataatgcccctaaaaatccttattgttcttgca 99
>27865_mml-mir-365-2:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 5e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 38 tcataatgcccctaaaaatccttattgctcttgca 72
||||||||||||||||||||||||||| |||||||
Sbjct: 65 tcataatgcccctaaaaatccttattgttcttgca 99
>28602_hsa-mir-365-2:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 5e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 38 tcataatgcccctaaaaatccttattgctcttgca 72
||||||||||||||||||||||||||| |||||||
Sbjct: 65 tcataatgcccctaaaaatccttattgttcttgca 99
>30969_ppy-mir-365-2:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 5e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 38 tcataatgcccctaaaaatccttattgctcttgca 72
||||||||||||||||||||||||||| |||||||
Sbjct: 65 tcataatgcccctaaaaatccttattgttcttgca 99
>33340_bta-mir-365-2:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 5e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 38 tcataatgcccctaaaaatccttattgctcttgca 72
||||||||||||||||||||||||||| |||||||
Sbjct: 65 tcataatgcccctaaaaatccttattgttcttgca 99
>34073_ssc-mir-365-2:mirbase
Length = 80
Score = 61.9 bits (31), Expect = 5e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 38 tcataatgcccctaaaaatccttattgctcttgca 72
||||||||||||||||||||||||||| |||||||
Sbjct: 44 tcataatgcccctaaaaatccttattgttcttgca 78
>34074_ssc-mir-365-2:mirbase
Length = 80
Score = 61.9 bits (31), Expect = 5e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 38 tcataatgcccctaaaaatccttattgctcttgca 72
||||||||||||||||||||||||||| |||||||
Sbjct: 44 tcataatgcccctaaaaatccttattgttcttgca 78
>30343_ptr-mir-365-2:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 41 taatgcccctaaaaatccttattgctcttgca 72
|||||||||||||||||||||||| |||||||
Sbjct: 68 taatgcccctaaaaatccttattgttcttgca 99
>27146_eca-mir-365:mirbase
Length = 66
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 38 tcataatgcccctaaaaatccttatt 63
||||||||||||||||||||||||||
Sbjct: 41 tcataatgcccctaaaaatccttatt 66
