miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26030_gga-mir-451:mirbase
Length = 69
Score = 91.7 bits (46), Expect = 6e-20
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 8 gggaaaccgttaccattactgagtttagtaatggtaacggttctgc 53
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gggaaaccgttaccattactgagtttagtaatggtaacggttctgc 60
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 12 aaccgttaccattactgagtttagtaatggtaacggtt 49
|||||||||||||||| | | ||||||||||||||||
Sbjct: 56 aaccgttaccattactaaactcagtaatggtaacggtt 19
>31556_oan-mir-451:mirbase
Length = 85
Score = 87.7 bits (44), Expect = 1e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 4 ggcggggaaaccgttaccattactgagtttagtaatggtaacggttct 51
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 ggcgaggaaaccgttaccattactgagtttagtaatggtaacggttct 64
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 12 aaccgttaccattactgagtttagtaatggtaacggtt 49
|||||||||||||||| | | ||||||||||||||||
Sbjct: 62 aaccgttaccattactaaactcagtaatggtaacggtt 25
>32084_mmu-mir-451:mirbase
Length = 72
Score = 87.7 bits (44), Expect = 1e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 4 ggcggggaaaccgttaccattactgagtttagtaatggtaacggttct 51
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggcgaggaaaccgttaccattactgagtttagtaatggtaacggttct 57
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 12 aaccgttaccattactgagtttagtaatggtaacggtt 49
|||||||||||||||| | | ||||||||||||||||
Sbjct: 55 aaccgttaccattactaaactcagtaatggtaacggtt 18
>33383_bta-mir-451:mirbase
Length = 71
Score = 87.7 bits (44), Expect = 1e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 4 ggcggggaaaccgttaccattactgagtttagtaatggtaacggttct 51
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ggcgaggaaaccgttaccattactgagtttagtaatggtaacggttct 56
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 12 aaccgttaccattactgagtttagtaatggtaacggtt 49
|||||||||||||||| | | ||||||||||||||||
Sbjct: 54 aaccgttaccattactaaactcagtaatggtaacggtt 17
>34473_dre-mir-451:mirbase
Length = 60
Score = 83.8 bits (42), Expect = 2e-17
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 4 ggcggggaaaccgttaccattactgagtttagtaatggtaacggttctgc 53
||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4 ggcggcgaaaccgttaccattactgagtttagtaatggtaagggttctgc 53
>34102_ssc-mir-451:mirbase
Length = 65
Score = 81.8 bits (41), Expect = 6e-17
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 11 aaaccgttaccattactgagtttagtaatggtaacggttct 51
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 aaaccgttaccattactgagtttagtaatggtaacggttct 54
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 12 aaccgttaccattactgagtttagtaatggtaacggtt 49
|||||||||||||||| | | ||||||||||||||||
Sbjct: 52 aaccgttaccattactaaactcagtaatggtaacggtt 15
>26850_cfa-mir-451:mirbase
Length = 69
Score = 79.8 bits (40), Expect = 2e-16
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 4 ggcggggaaaccgttaccattactgagtttagtaatggtaacggttct 51
|||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9 ggcgaggaaaccgttaccattactgagtttagtaatggtaatggttct 56
>27452_mdo-mir-451:mirbase
Length = 62
Score = 79.8 bits (40), Expect = 2e-16
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 4 ggcggggaaaccgttaccattactgagtttagtaatggtaacggttct 51
||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 3 ggcggggaaaccgttaccattactgtgtttagtaatggtaagggttct 50
>32919_rno-mir-451:mirbase
Length = 72
Score = 79.8 bits (40), Expect = 2e-16
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 4 ggcggggaaaccgttaccattactgagtttagtaatggtaacggttct 51
|||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10 ggcgaggaaaccgttaccattactgagtttagtaatggtaatggttct 57
>25862_xtr-mir-451:mirbase
Length = 62
Score = 77.8 bits (39), Expect = 9e-16
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 10 gaaaccgttaccattactgagtttagtaatggtaacggttctg 52
||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 11 gaaaccgttaccattactgagtttagtaatggtaagggttctg 53
>27185_eca-mir-451:mirbase
Length = 72
Score = 77.8 bits (39), Expect = 9e-16
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 9 ggaaaccgttaccattactgagtttagtaatggtaacggttct 51
|||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 15 ggaaaccgttaccattactgtgtttagtaatggtaacggttct 57
>27913_mml-mir-451:mirbase
Length = 72
Score = 77.8 bits (39), Expect = 9e-16
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 9 ggaaaccgttaccattactgagtttagtaatggtaacggttct 51
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 15 ggaaaccgttaccattactgagtttagtaatggtaagggttct 57
>28661_hsa-mir-451:mirbase
Length = 72
Score = 77.8 bits (39), Expect = 9e-16
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 9 ggaaaccgttaccattactgagtttagtaatggtaacggttct 51
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 15 ggaaaccgttaccattactgagtttagtaatggtaatggttct 57
>28662_hsa-mir-451b:mirbase
Length = 68
Score = 77.8 bits (39), Expect = 9e-16
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 9 ggaaaccgttaccattactgagtttagtaatggtaacggttct 51
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 56 ggaaaccgttaccattactgagtttagtaatggtaatggttct 14
>30382_ptr-mir-451:mirbase
Length = 71
Score = 77.8 bits (39), Expect = 9e-16
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 9 ggaaaccgttaccattactgagtttagtaatggtaacggttct 51
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 14 ggaaaccgttaccattactgagtttagtaatggtaatggttct 56
>31014_ppy-mir-451:mirbase
Length = 72
Score = 77.8 bits (39), Expect = 9e-16
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 9 ggaaaccgttaccattactgagtttagtaatggtaacggttct 51
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 15 ggaaaccgttaccattactgagtttagtaatggtaatggttct 57
