miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26034_gga-mir-456:mirbase
Length = 112
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 3 gtgtgtgagcaggcatcttctcagcctacatgtggattcctaaatctgcaggctggttag 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 gtgtgtgagcaggcatcttctcagcctacatgtggattcctaaatctgcaggctggttag 82
Query: 63 atggttgtcatgcattc 79
|||||||||||||||||
Sbjct: 83 atggttgtcatgcattc 99
>25552_pma-mir-456:mirbase
Length = 85
Score = 67.9 bits (34), Expect = 1e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 11 gcaggcatcttctcagcctacatgtggattcctaaatctgcaggctggttagatggttgt 70
||||||||||| ||||||||| |||| |||| | ||||||||||||||||||||||||
Sbjct: 14 gcaggcatctttccagcctacacgtggggtcctgattctgcaggctggttagatggttgt 73
Query: 71 ca 72
||
Sbjct: 74 ca 75
>34478_dre-mir-456:mirbase
Length = 85
Score = 65.9 bits (33), Expect = 4e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 4 tgtgtgagcaggcatcttctcagcctacatgtggattcctaaatctgcaggctggttaga 63
|||||| ||||||||||| ||| |||||||||||| | | |||||||||||||||||
Sbjct: 7 tgtgtgtgcaggcatctttccagtctacatgtggatccaggagtctgcaggctggttaga 66
Query: 64 tggttgtca 72
|||||||||
Sbjct: 67 tggttgtca 75
